Geoglobus ahangari: GAH_01938
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Entry
GAH_01938 CDS
T03939
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gah
Geoglobus ahangari
Pathway
gah04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GAH_01938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gah03019
]
GAH_01938
03009 Ribosome biogenesis [BR:
gah03009
]
GAH_01938
04131 Membrane trafficking [BR:
gah04131
]
GAH_01938
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gah04147
]
GAH_01938
Messenger RNA biogenesis [BR:
gah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GAH_01938
Ribosome biogenesis [BR:
gah03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GAH_01938
Membrane trafficking [BR:
gah04131
]
SNARE
SNARE associated proteins
Others
GAH_01938
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GAH_01938
Exosome [BR:
gah04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GAH_01938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_22
Vps4_C
AAA_14
AAA_33
RNA_helicase
nSTAND3
AAA_28
AAA_17
Mg_chelatase
AAA_7
NPHP3_N
AAA_18
AAA_3
Sigma54_activat
IstB_IS21
Parvo_NS1
DUF815
ABC_tran
AAA_24
ATPase
NB-ARC
TsaE
SLFN-g3_helicase
AAA_19
AAA_lid_PRS2_C
AAA_30
PhoH
bpMoxR
Zeta_toxin
Viral_helicase1
AAA_11
Cytidylate_kin2
Zot
Motif
Other DBs
NCBI-ProteinID:
AKG90789
UniProt:
A0A0F7IC44
LinkDB
All DBs
Position
complement(1658037..1660409)
Genome browser
AA seq
790 aa
AA seq
DB search
MSEDVYLRVAEAYHRDVGRGIARVDPEVMAQLGLQSGDIIEITGKNKVPAIVWPGYPEDR
GKRIIRIDGNIRSNAGVSIDDKVKIRKVEAKPAEKITLAPTEPVRLMGGEAYLQRLLEGR
PVIRGQKIRVEVFGHVLTFVITSTKPSGVVIVSRNTQVELKEKPVEEVKRQVPNVTYEDI
GGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLHGPPGTGKTLIAKAVANEVDAHF
ISISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVERRVVA
QLLTLMDGLEARGQVIVIGATNRPDAVDPALRRPGRFDREIEIGVPDKEGRKEILQIHTR
GMPIEPDYSRSEVLRILEEFKSSERFDREKVERIIEKVEKAGSEDEVISALKEDEEIFSE
VKARLIDEMFDYIAELTNGFVGADLAALAKEAAMHALRKRMEKGEIDIEAEEIPAEVLES
LKVTMDDFLEALKNIEPSAMREVLVEVPNVKWDDIGGLEKAKQELREAVEWPMKYPELFR
EVGIKPPKGILLYGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFR
KARQVAPCIIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRP
DMVDPALLRPGRIERHIYIPPPDKEARKEIFRIHTRNMPLAEDVNLEELAEKTEGYSGAD
IEAVCREAGLTAIREAISKYSEDEVKRAVKEIRVTRDHFMKAIEKVKPSLTEEDIKKYEE
IVKDFHKMYS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggatgtgtatttgagggttgctgaggcttaccacagggatgttggaagggga
atagcgagagtggatcccgaggtaatggcccagctcggactgcagagcggggacataata
gagatcacaggaaagaacaaggtccccgccatagtgtggcccggttacccagaggacagg
gggaagaggataatcaggattgacggcaacatcaggagcaacgcaggcgtgagcatcgac
gacaaggtgaagataagaaaggtcgaggcgaagcctgcggagaagataaccctcgccccg
acagagccagtgaggctgatgggtggcgaagcatacctccagaggcttctcgaaggcaga
ccggtgataaggggtcagaagatcagggtggaggttttcggccacgtactgacgttcgtg
ataacgtccaccaagccgtcgggcgttgtgatagtctcgaggaacacgcaggtcgagctc
aaggagaagcccgtcgaagaggtgaagaggcaagtgcctaacgtaacctacgaggacatc
ggtggtctgaagagggagctcaggcttgttagagagatgatagagcttccgctgaagcac
ccagagctgttccagaggctcggaatagagccgcccaagggagtgctgctccacggacct
ccgggcactggaaagaccctgatcgctaaagcggttgcgaacgaggttgacgcgcacttc
atctcgatcagcgggccagagataatgagcaagtactatggcgagtcagagcagaggctg
agggagatttttgaggaagcgaaggagaacgctccgagcataatattcatagacgagata
gacagcatcgctccgaagagggaagaggtcactggtgaggtcgagaggagggtcgtggcc
cagcttctcaccctgatggacggcctcgaggcgaggggacaggtgatagtcataggtgca
accaacaggcctgacgcggttgatccagcgttgaggaggccgggcaggttcgacagggag
attgagattggtgtgcctgacaaggagggcaggaaggagatactccagatacacacaagg
ggaatgcccatcgagcctgactacagcaggagcgaggttctcaggatactcgaggagttc
aagagctcagaaaggttcgacagggagaaggtcgagaggataatcgagaaagtcgagaag
gccggcagcgaggacgaggtcatctcagctctcaaggaggacgaggagatcttcagcgag
gtcaaggcgaggctcatagacgagatgtttgattacatagccgagctcaccaacggattt
gtcggtgcagacctcgcagcgctcgcgaaggaggcggcgatgcatgcgctcaggaagagg
atggagaagggagagatagacatcgaggctgaggagataccggctgaggtgctcgagagc
ctgaaggtgaccatggacgacttccttgaggctctgaagaacatcgagccatcggcgatg
agagaggtactggttgaggttcctaacgtcaagtgggacgacataggcgggctcgagaag
gccaagcaggagctaagagaggcagtggagtggccgatgaagtaccctgagctcttcagg
gaagtcggaataaagccgccaaagggtatactgctctacggccctccgggcacaggaaag
acgctgctcgcaaaggctgttgcgaatgagagcaacgccaacttcataagcgtcaagggg
cctgagctgctgtccaagtgggtcggagagagcgagaagcacgtgagagagatgttcagg
aaggcaagacaggtggcgccgtgcataatcttcttcgacgagatagacagcctcgcccca
aggagaggaggaataggagactcgcacgtcaccgagagggtggttagccagctgctcacc
gagctcgacggtctcgaggagctcaaggacgtggtggtgatcgcagcgaccaacagaccg
gacatggtggatccggcactgctgagaccgggcaggatagagaggcacatatacatcccg
ccaccggacaaggaggcgaggaaggagatattcaggatccacacgaggaacatgccactc
gcggaggatgtaaaccttgaggagcttgcggagaagaccgagggctacagcggtgctgac
atcgaagccgtttgcagggaggctggcctgactgccatcagggaggcgatatcgaagtac
agcgaggacgaggtaaagagggcagtgaaggagatcagggtcacgagagaccacttcatg
aaggcgatagagaaggtgaagccgagcctcaccgaggaggacataaagaagtacgaggag
atcgtgaaagatttccacaagatgtactcctaa
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