Granulosicoccus antarcticus: IMCC3135_00020
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Entry
IMCC3135_00020 CDS
T04938
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gai
Granulosicoccus antarcticus
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gai03032
]
IMCC3135_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
gai03400
]
IMCC3135_00020 (gyrB)
Enzymes [BR:
gai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IMCC3135_00020 (gyrB)
DNA replication proteins [BR:
gai03032
]
Prokaryotic type
DNA Topoisomerases
IMCC3135_00020 (gyrB)
DNA repair and recombination proteins [BR:
gai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IMCC3135_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ASJ70135
UniProt:
A0A2Z2NI33
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Position
4165..6576
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AA seq
803 aa
AA seq
DB search
MSDSPSYDSSNIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSA
INVTIHTDESVSVSDDGRGIPVDIHKEEGRSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GISVVNALSEWLKLTIHRDGFIHTQEYSDSKPVSDLQQGEATELTGSKIHFKPSADTFTN
IHFEYEILRKRLRELSFLNRGVRIILKDERSDQTDTFEAEGGIRAFVEHLNRKKNSVHGT
VIHTLGSKDDVAVEVALQWTDTYQENIFCFTNNIPQRDGGTHLAGFRSAMTRTLNQYMET
VGVSTKAKVSATGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKGIVESVLGEFMHD
FLQENPTEARQITAKIIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAKSE
IYLVEGDSAGGSAKQGRDRRRQAILPLKGKILNVEKARFDKMLQSVEVGTLITALGCGIG
RDEFDIDKLRYHYIVIMTDADVDGSHIRTLLLTFFYRQMPELIRRGHIYIAQPPLFKVKK
GKQERYVKDEPELNAYLLQLALDGARLHVNADAPSISETGFESLAQEYMRVGLLMNRMQR
RFNRDILEAIINQSALTEDDLKDASKVAAYGKELVGTLNSQLSVTSQYTSTPLEKDELHG
VQLIRRVHGNDKEVFLDPGFFKSPDYRTLAKLAEKLVDMLGEGAYVARGEREQPVSTFKD
AMEWLLTESKRGLTIQRYKGLGEMNPEQLWETTMDPTARRMLQVNIEDAIAADEVFDTLM
GDQVEPRRDFIERNALSVANLDI
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattctcccagctacgactccagcaacatcaaggttctcaaaggactcgatgca
gtacgcaagcgtcccgggatgtacattggagacacagacgacggtaccggtttacaccat
atggtgtttgaggtcgtcgacaactccattgatgaggctcttgcaggacactgcagtgcc
atcaacgtcactatccataccgacgaatccgttagtgtttcagatgacggtcgcggtata
ccggtagatattcacaaagaagaaggccgttccgccgcagaagtcatcatgactgtgctg
cacgccggcggtaaattcgacgataactcctacaaggtttccggcggattgcatggcgta
ggcatttcagtcgtcaacgcactcagcgaatggttgaaactgactattcatcgcgatggg
ttcattcatacccaggaatacagcgatagtaagccagtgtcagaccttcaacagggcgaa
gccactgaacttaccggttcgaagattcatttcaaacccagcgccgatacgtttaccaac
attcacttcgaatacgaaattttgcgcaaacgactgcgtgaattgtcgttcttgaatcgt
ggtgttcgcataatcctgaaagatgaacgaagcgatcaaaccgatacattcgaagctgaa
ggcggtattcgcgccttcgttgagcatctgaaccgcaagaaaaactcagttcacggcacg
gtcatccacacattgggctcgaaagacgatgtcgcagtagaagtcgcgctgcagtggacc
gatacctatcaggaaaacattttctgctttaccaacaatattccacaacgggatggtggt
acgcacctggctggctttcgttctgccatgacacgcacgcttaaccagtacatggaaacc
gttggtgtcagcaccaaggccaaggtttctgccaccggtgatgacgcacgcgaaggactg
acagcggttctatcggtcaaggtacctgatccgaaattttcgtcgcagaccaaggacaaa
ctggtctcctcggaagtcaaaggcattgtcgaatccgtgctcggtgaattcatgcacgac
tttctgcaggagaatccgacagaagctcgacagatcacagccaagatcattgatgctgcc
cgtgctcgagaagcggcgcgtaaagcccgcgaaatgacacgtcgcaagggagctctggat
attgcagggctgccaggtaagctggctgattgtcaggagaaagatccagccaaatcagaa
atctatctggtggaaggggactcggctggtggatcagccaagcaaggccgcgatcgtcgt
cgtcaagccattctgccgctgaaaggcaagatcctgaatgttgaaaaggctcgattcgac
aagatgctgcaaagcgtcgaggtcggcactctgatcacagcgctaggttgcgggattggt
cgggatgagttcgacatcgacaagctgcgttatcactacattgtcatcatgaccgatgct
gatgtcgatggctcccatatccgaactctgctcctgacattcttttatcgtcagatgcca
gagctcattcgacgtggtcatatctacatcgcacaacctcctttgttcaaggtcaagaag
ggcaagcaggaacgctacgtcaaggacgaacctgaactcaacgcctatctgttacagctg
gctctggatggtgctcgcctgcatgttaatgcagatgcccccagcatcagcgagaccggt
ttcgagtcactggcccaggaatacatgcgcgttggattgctgatgaatcgtatgcagcga
cgtttcaatcgcgacattctggaagccattatcaaccagtcagccctgacggaagatgat
ctgaaggatgcaagcaaagtcgctgcctatggcaaggaactggtaggcacactcaattcg
caattgtccgtcacctcgcaatacacctctacaccactagagaaagatgaactgcacggt
gtgcaattgatccgacgcgtgcatggcaacgacaaggaagtattcctggatcctggattc
ttcaaatctccggactaccgcaccctggccaagttggcagagaagctggtagatatgctg
ggtgagggcgcttatgtcgctcgaggtgagcgtgagcagccggtcagcacgttcaaggat
gcgatggagtggctgttaactgaatccaagcgaggcctgaccattcagcgctacaaaggt
ctgggtgaaatgaatcctgagcaattgtgggaaaccacaatggacccgacggcgcgacgc
atgctccaggtcaatatcgaggatgccattgctgcagatgaagtattcgacactctgatg
ggcgatcaggttgaacctcgtcgtgactttatcgaacgtaatgctctgtcggttgcaaac
ctggacatctag
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