Granulosicoccus antarcticus: IMCC3135_02560
Help
Entry
IMCC3135_02560 CDS
T04938
Symbol
pknD
Name
(GenBank) Serine/threonine-protein kinase PknD
Organism
gai
Granulosicoccus antarcticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4347
NHL
Laminin_G_3
Pentaxin
Cadherin_4
Big_9
DUF5128
SGL
Cadherin_5
Cadherin
Lectin_C
Lactonase
Chlam_PMP
Motif
Other DBs
NCBI-ProteinID:
ASJ70625
UniProt:
A0A2Z2NJE4
LinkDB
All DBs
Position
complement(562089..569570)
Genome browser
AA seq
2493 aa
AA seq
DB search
MNQAGKPDSRGKTAFQLETLEKRILFSADLPLPVLELSSSDSGAHIGLISSIDSSLQSST
SAANSEQHRQDKLHVVIIDPATPDYESIVAELENQAGDSLQVHVLDADRDGITQISAIVA
QYESIGTLHLVVAGSESHFNMGDSTVDLTELLVRADELADWQDSFTVGADMLIHGFDQVS
GDVGHSLLSTLSNLTSTDVSVSDEHAGNIIEQDRVNQLEPTTRQSSSVAAANALPAQEPR
RELVFVDSRVEDYETLIQDIRTSTDSSRTIDVMILDPTRDGVEQIAEILTRYESLDAIHI
VSHGDEGTVQLGDTWLSNKTLSSYTHQLASWSDALSQDADLLFYGCDLAGSDSGKALIAS
LARLTDADVNASSDRTGSANLGGNWNLESRTGDIETTVAFSTEARQKWQGILASFTVDTL
LDTADATPGDGIAEDAAGNTSLRAAMEEANALGGAHTISLGAGTYTLSLGELEIDSDITL
TGAGTDQTFISGDELSRVINIASGTVTLSGLTIQDGDAAVSAGGGININGTANVTLDTVN
LISNTGKDGGAINNAGALIIQSSTIDGNTSTNKGGGIHSDGSLTLTDTTLSNNSALSRSG
GGVFDNGAPSSFTNVTISGNYAKDPGGGIYTQGAISLQNVTITENVSDAEGGGIAEAGSS
TTLHNVIVAGNSAVSDSDVHDTFSSSGGNLIGDVGTATGLTDGVNSDQVGSTLSPVDARL
GPLADNGGPTLTHALLAGSSAIDGGTATGAPATDQNGTARNDGSVDIGAFEFTQQAAPVD
LQVVSATDGSLSVNEDGGNDAYLIADAGSAIFGGLTDFTLEARFSADTPPLSNYSDFISY
AIPSESDEVRLAFEHTSASASHIELTINGVIVESTAYNANVLFDGKEHTLSATWSSLTGA
YEVLVDGISILSGTGLSTGHTLLAGGQLTMIRDQDSPGGDFDLEEVFQGKLHDFRIFNDV
RSNAEILDNYLDTLVYDEPGMIANWTFNTFSLDSTTGNRIVTDSVSGNNLTAMNVGAVGG
YVTSTPELLLAVEENSADGTVVGAVSGTDTQRDTRIAALLAADSSLAYNAETGKFYRHVN
SAVNFITARDAATGSNLNGIAGQLVTVDSANENELVLQYVLDSGNEIWLGASDAGTEGEW
HWLDGASESSEKFWSGGATGARVDGEYASHMGLSDAAGEDFLRITATGAWYDNNGSNFTY
IVEWNADEVLDATDALTYTIQSQTETSAFAIDADTGVISVADGSKLDYETNSPHILTIRV
TDGDSNIFEKNVNVLLNDLPDDASWTVPIGQTTNEDTSFTFSTVDGNAIEFSSGKPANQP
ASASLSVSSGTLTLGSTAGITFLDGTGDGEAALVVFGTEAAINSALDGLSYSPGENYHGS
DSLIVTTGSSAATEAGLHARFDFENGVFTDQSGNGNHASTSSDPSKPSPGTDSERGDVLD
FDGDDKLTVSNGTQGLGGELTLASWVNLDAIEEDNVVLSLADQFYIELDNHNPTAGFGVS
YTAFGTSHSTASTYDVAGDGWHHLAVTFSDTSDEVNFFVDGVLVNTASSAAVPDWSTYST
QDIAIGSLVGSQAGSVPMAGSLDDVRIYNAALSENEIVLMMGHQGHDTATVGITVEPIND
SPLISAPVAVTVAEEAPLVFSAANGNQIIITDVDGDSGGEKYSVQVVMDHGTATLASLAG
LDSVSGDGSDYIDIYGTLASVNNALEGLTYVGPTDYDEATRIRIFVSELYFNPPSDFGIL
EDEHTIAVAITPVNDVPVTVAESYSVIEDETLTVAASGVLSNDSDPDSTDPALVSQFGIA
GTLDGEFTNPRGIEFDASGNLYVADRNNHRIQIFDSGGNHLLTFGSSGTADGQFNSPADV
AIDSSGNIFVVENNNDRIQKFDSAGNHLLTWGVTGAGDSQFENPSAIAVDASDNIYVTDT
SNDRVQKFDNLGNHLLSWGNYGTADGQFDAPLTIAIDANGVIWVGESGNRIQQFDTSGNH
LLTFGSSGNDIGELSGPSAIAFDADGYAYIADNFNQRIQVFDSAGNYRLDWGTYGTAAGE
FAHPAGIAVDSTGQVWVADTNNSRIQIFAATEASGEVITATLVSGPSHASGFTLNADGSF
TYTPDTDWNGTDSFVYEADDGNGGRTQQSVTIDVGSENDAPVLDNSGATTLPTITKFQTN
NGGTDIASILASAGDPITDADTDALEGIAITTLASGNGTWEYLLNGAGSWAAIGSVTTTS
ALLLGADDLVRFVPNGVSGTTASFDFHAWDQTTGTAGTKADASTGGGNTAYSTASESAAI
TVVDANTAPVLDNAQSPIISPVDEDAGVPTGAVGSLVSELVDFATPSGQVDNVTDPDSGA
GLGIAISAADTSNGTWFYSTNNGSTWNTLGAVSDTNARLLAADASTRLFFQANADYHGTL
ANAITFHAWDQTSGSNGTTTVLTGSGSETVLDNFSTVSYSNNNGSQSWSTGWIEVDSGGG
LMRELEAATLGSRAGNSCSNQKHWPKRCTERSI
NT seq
7482 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggcaggcaagccagacagccgaggcaagaccgcctttcagctggagacactc
gaaaaacggatactgttctccgctgacctgcctttgcctgtcctcgaactcagttcgtcc
gactccggcgcgcatatcgggctgatctcttcaatagattcgtccttgcagtcgtccacc
tcagccgccaacagcgagcagcacagacaagacaaactgcacgttgtgatcatcgatccg
gcgacgccggactacgaatcgatcgtggccgagctggagaatcaagccggggactcgttg
caggttcatgtgcttgacgctgatcgtgatggcattacgcaaatatcggcaatagtggcc
cagtacgaaagcatcggcaccctgcaccttgttgtcgctggctcagagtcccattttaac
atgggagattcaacagttgatctgacagagctgctggtgcgggccgatgagctggcagac
tggcaggacagctttaccgtgggtgccgatatgctgatccatggcttcgatcaggtttct
ggcgatgtggggcattcgcttttatccacactgtcaaacctgaccagcacggatgtctcg
gtatctgatgagcacgccgggaatatcatcgagcaagatcgtgtcaatcagctcgaacct
accaccagacaatcaagcagtgtggcagcagccaatgccttgcctgctcaggaaccacga
cgcgaactcgtattcgttgattctcgcgtagaagactacgaaaccttgatccaggatatt
cggacctctactgactccagccgtactatcgatgtcatgattctggacccgactcgcgat
ggggttgaacagatcgccgagatacttacacgttacgaaagtctggatgccatccacatt
gtctcccatggtgacgagggcactgtgcaactgggtgatacctggctatccaacaagaca
ctctcctcctacacgcaccagcttgccagctggagcgatgccctctcccaggatgctgac
ctgctcttttatggttgtgatctggccggcagtgacagcggtaaagcgctaatcgcctcg
ctggccaggctgaccgatgcagatgtcaacgctagcagtgaccgtaccggttcagcaaac
cttggtggtaactggaacctggaatccagaacgggcgacatcgagacgacagttgcattc
agcactgaggctcggcagaaatggcagggtattctggcaagcttcaccgtagatacacta
ctcgacaccgccgatgccacccccggcgacggtatcgccgaggatgctgctggcaatact
tctcttcgtgcagccatggaagaagccaatgcactgggtggtgctcatacgatcagtctg
ggcgctggtacctataccttgagcctgggcgaacttgaaatcgacagcgacattaccctg
acgggtgcaggaaccgatcagacctttattagcggcgacgaactcagccgcgtcatcaac
attgcctccggcaccgttacccttagtgggctgactatccaggacggagatgcagctgtc
agtgcgggaggcggaataaacatcaatggcaccgcgaatgtcacattagacactgtcaat
ctgattagcaatacgggaaaagacggcggcgcgatcaacaacgccggcgcactcatcatt
cagtcgtccactattgatggcaatacgtcgacgaacaagggcggcggcattcatagcgat
ggcagcctgactctgaccgacacaaccctttccaacaactccgccttgtccaggtccggc
ggaggggtttttgacaatggagcaccctcatcgttcaccaatgtgacgatcagcggaaac
tatgccaaggacccaggtggcggtatctatactcaaggggcaatttcactacagaacgta
acgatcacggaaaacgtctcagatgcagagggtggcggaatcgctgaggccggttcatcg
actacgctgcacaacgtaatcgtggcaggaaactcggcagtcagcgattcggatgtccac
gacaccttttcctccagtggtggcaatctgatcggcgatgtgggaaccgcgaccggtctc
accgatggcgtcaacagcgatcaggtcggtagtacgctcagccccgttgatgcacgactt
ggcccccttgcggacaacggcggcccgacactgacgcatgccttgctggcaggcagttcg
gcgattgatggcggcaccgctaccggcgcgccagcaaccgatcagaacggcaccgctcgc
aatgatggctccgttgatatcggtgcgttcgagtttacccagcaagcagcccccgttgat
ctacaagtcgtgtcggcaaccgacggtagcttgagcgttaacgaggatggtggcaacgat
gcctacctgatcgcagatgcagggtcagctatctttggcggtttgaccgactttacgctc
gaagcacgtttctcggctgacaccccgcccttatcgaattattccgacttcatcagctat
gcgattccatcagaaagcgatgaagtgcgattagcctttgaacataccagtgccagtgcc
tctcatatcgaactgaccatcaatggtgtcatcgtcgagtccaccgcttacaacgcaaac
gtgctttttgacggcaaggagcacacccttagcgccacctggtcaagtttaaccggcgcc
tacgaggtccttgtcgatggcatttcgatcttgtcaggtacaggcttgagcacaggtcat
accttgcttgcaggcggtcaactgacaatgatacgggaccaggattcgccaggcggagat
ttcgatctggaagaggtttttcagggaaaactgcatgacttccgcattttcaatgatgtg
cgatccaacgctgaaattctggacaattatctggataccctggtctacgacgaaccaggc
atgatcgccaactggaccttcaatacgttctcgctggattcaacaacgggcaatcgaatc
gtgaccgactcggtcagtggcaacaacctgacggcgatgaatgtgggtgctgtcgggggc
tacgtcaccagtacgcccgagttgttgctggccgttgaagagaatagtgccgatggaaca
gtggtaggggctgtgtctggaacggacacacaacgtgatacccgcattgccgccctgctc
gccgccgactccagtctggcctacaacgccgagacaggaaaattttatcggcatgtcaat
tcagcagtcaatttcatcacggcacgtgatgcggcaacgggatccaatctgaacggtatc
gccggacaactggttaccgttgattctgccaatgagaatgagctggttctacagtacgtg
cttgattcaggcaatgagatctggttgggtgcttcggatgcaggcaccgaaggagagtgg
cactggctggacggcgcaagcgagtccagcgagaaattctggagtggtggggcaacgggt
gcacgggtggatggagaatacgcctcacacatgggtctctcagatgccgccggggaagat
ttcttgcggataactgccacgggtgcctggtatgacaacaacggaagcaatttcacctac
atcgtcgaatggaatgcggacgaggtgctcgacgcaacggatgcactgacctacaccatt
caatcgcagactgaaaccagtgctttcgctatcgatgccgacacgggtgtcatcagcgtg
gccgatggttcgaagctggactatgaaaccaactcgccgcatatcctgactattcgggtg
accgatggcgatagcaatatcttcgaaaaaaacgttaacgttctgctgaatgacctgcct
gacgatgcctcctggacagtaccgatcgggcaaaccaccaacgaagataccagcttcaca
ttttcgacagtggatggcaacgctatcgaattcagcagtggcaagcctgccaaccaaccg
gccagtgccagcctgagtgtcagcagtggaacactgacactgggtagcacggcaggtatc
acttttctcgatggaaccggcgatggtgaagcagcgctggttgttttcggcacagaggcg
gccatcaactctgcactggatggtctgagctatagccccggcgagaattatcatggcagt
gattcgctgatcgttaccacaggatcaagcgctgccaccgaagctggcctgcatgcgcgg
ttcgatttcgagaacggtgttttcaccgatcagagtggtaatggcaaccatgccagtacg
tctagtgatcccagcaagccaagccctgggacagactcagaacgtggcgacgtgcttgac
ttcgatggcgacgacaagctcaccgtcagcaatggtactcagggtcttggtggtgaattg
acccttgcctcctgggtgaaccttgatgcgattgaggaggacaatgtcgtgctgtcgctg
gctgaccagttttatatagaactggacaaccacaatccgacggcaggctttggtgtcagc
tatacggcctttggcacaagccacagtacggcatctacctatgatgtcgctggtgacggc
tggcatcaccttgcggttaccttcagtgataccagtgacgaggtgaatttcttcgttgac
ggcgtactggtgaacaccgcctcatccgcagccgtgccggactggagcacttattccact
caggatattgccatcggcagcctggtcggttcgcaagccggtagtgttccgatggctggc
agcctggatgatgtgcggatatacaatgccgccctcagcgagaatgaaatcgtgctgatg
atggggcatcagggccacgatactgccaccgtgggtatcacggtggaacccatcaacgat
agccccttgatttcggctccagtggcggtaactgttgcagaagaagcaccattggttttt
tcagcagctaacggcaatcagattattatcactgatgtagatggcgatagtggtggagaa
aagtacagtgttcaggtcgtcatggaccatggaaccgcgacccttgcctccctggccggt
ttagattcggtcagcggtgatggcagcgactacatcgacatatatggcacacttgcctca
gtcaacaacgctctggaaggattgacctacgttggcccaaccgattatgacgaagccacc
cggatccgtattttcgtctcagagctctacttcaaccctccttcggatttcgggatcctc
gaagacgagcacaccatcgccgttgccatcacgccggtcaatgatgtaccggttacagtg
gcagagtcctacagcgtcatcgaggatgaaacattaacggttgcagcctctggcgtgtta
tcaaacgacagcgatccggattcaactgatccggctttagtgagccaattcggcattgct
gggacccttgatggtgaatttaccaaccccagagggattgaatttgacgcctcagggaat
ctttatgtcgcagacagaaacaaccacaggattcagatatttgacagtggcggtaatcat
cttctgacgttcggttcatctggcacagcggatggccagttcaattcacccgctgatgtt
gccatcgactcgtcaggaaacatttttgttgtcgaaaataacaatgaccgtatccagaag
tttgatagtgctggaaatcatcttttgacttggggtgtcactggcgcaggtgacagccaa
ttcgagaacccttctgcaattgcagtggatgccagcgacaacatttatgtgacggatacg
agtaatgatcgtgtgcagaaattcgataatctgggcaaccacctgcttagctggggcaac
tatggcacggcagatggtcagtttgatgcaccactaacaattgccatcgatgccaatggg
gttatctgggtgggggagtccggcaatcggattcaacaatttgacacttctggcaatcac
ctgctgacattcggtagctcgggcaacgatattggcgagctttctggccctagcgcaatc
gcctttgacgcagacggttatgcctatattgccgataacttcaaccaacgaattcaagtc
ttcgattctgctggaaactatcgcctggattggggcacttatggcactgcggcaggtgag
tttgcgcatccagctggaattgcagtggattcaaccggacaagtctgggtcgccgatacg
aataatagccgtatacagatatttgcagcgactgaagctagtggcgaagtcattaccgca
actctcgtatctggtcccagccatgcttcgggatttactctgaacgctgatggatcattc
acctatacgcccgatacggattggaatggaaccgatagctttgtctacgaagctgacgat
ggtaatggcggtcgtacgcagcagagcgtgacgattgacgttggctcggagaatgacgca
ccggtactggacaatagcggcgccacgacactgccgacaatcacgaaatttcagaccaac
aatggcggcacggacatcgcctcgattcttgccagtgctggagacccgatcacggatgcc
gataccgatgccctcgaagggatcgctatcacaaccctggccagtggcaatggaacttgg
gaatatttgcttaacggtgcaggctcgtgggcggcaatcggctcggtcaccactacatcg
gcgttgttgctcggtgcagacgatctggtccggttcgtgcccaacggcgtcagcggaacc
acagccagtttcgattttcatgcatgggaccagacaactggcacggcgggtacgaaagca
gatgcctcaaccggtggcggtaataccgcctacagcaccgcatcggaatcggcagctatc
actgtcgtcgatgccaatacagcccccgttctggataacgcccagagtccgataatctcc
cctgtggatgaagatgccggcgttccgacaggtgctgttggttcgttggtgtctgaactg
gtagatttcgccacgccatccggccaggtggacaatgtcactgatccagatagtggcgct
gggctgggtattgcgatctcagcggccgatacaagcaacggcacctggttctattcaacg
aacaatggcagtacctggaatacactgggagcggtcagcgataccaatgcacgattgctg
gccgcagacgcatcgacacgattgttcttccaggccaatgcggattatcacggcacactt
gccaatgccatcacgttccacgcctgggaccaaaccagcggaagcaacggaactacaacg
gtactgactggttccggatcagaaaccgttctggacaacttcagcacggtctcctacagc
aacaacaatggctctcagtcctggtctacaggttggatagaggtcgattcgggggggggg
ctaatgcgggagctggaggcggcaactttggggtcaagagcggggaactcgtgctcaaac
caaaaacactggccgaagagatgtaccgagaggtcgatctga
DBGET
integrated database retrieval system
