Granulosicoccus antarcticus: IMCC3135_04005
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Entry
IMCC3135_04005 CDS
T04938
Symbol
rutR_1
Name
(GenBank) HTH-type transcriptional regulator RutR
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
gai
Granulosicoccus antarcticus
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gai03000
]
IMCC3135_04005 (rutR_1)
Transcription factors [BR:
gai03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
IMCC3135_04005 (rutR_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
HTH_Tnp_1_2
TetR_C_24
Motif
Other DBs
NCBI-ProteinID:
ASJ70914
UniProt:
A0A2Z2NUY1
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All DBs
Position
917166..917777
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AA seq
203 aa
AA seq
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MTSDQTYSQRKRAAILNAAAEEFRSNGYRETSMDRIAEVAQVSKRTVYKHFPSKDDLYRA
ITHELVLQEHYSIDGSYNQQQSLRSQLIHIATQEVAAFSSDTYLSNMRVLLGEAFRSPEI
VQKVFQDLPVNGGAFFEWINAAMDDGRLQIEDPRLATQQLLSLLKGILFWPQAMSMQGAV
SMKAQTTVIASAVDMFLDHYEVR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgatcagacctacagccagcgcaagcgtgccgctattctcaacgccgcagcg
gaagagttccggagtaatggctaccgggaaaccagcatggaccggattgctgaagtcgcg
caagtgagcaagcgtacggtatacaagcattttcccagcaaggatgatctttaccgggcc
attacccatgagcttgtcttgcaggagcattattcgattgatggcagctataaccagcag
caatcgctacgttcacaactgatacatattgccactcaagaggtggcagccttcagctcc
gatacctatctgtcgaacatgcgagtattgctgggagaagctttccgttcgccggaaatc
gtgcagaaggtctttcaggatctacctgttaacgggggcgcatttttcgaatggattaac
gccgccatggatgatggacgtctgcagatagaagacccgaggcttgccactcagcagttg
ctctctttgctcaaggggatcttgttctggccacaggcaatgtcgatgcaaggggctgtc
agcatgaaagctcaaacaacggtcattgcctcggccgttgatatgtttctggatcactac
gaagtcagatag
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integrated database retrieval system
