Granulosicoccus antarcticus: IMCC3135_05245
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Entry
IMCC3135_05245 CDS
T04938
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
gai
Granulosicoccus antarcticus
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gai03021
]
IMCC3135_05245 (rpoH)
Transcription machinery [BR:
gai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IMCC3135_05245 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
HTH_3
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
ASJ71162
UniProt:
A0A2Z2NII6
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All DBs
Position
complement(1223837..1224706)
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AA seq
289 aa
AA seq
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MSNALTAEKNTMPIPVITDDLNSYLAKIANIDLLTVEEEQILARRLRNDEDLDAARQLVM
SQLRFVVHIARTYKGYGLPMADLVQEGNIGLMKAVKRFDPDVGVRLISFAVHWIRAEIHE
YVIRNWRIVKVATTKSQRKLFFKLRSAKKQLNWFSQEEVEAVAADLGVDAKVVVEMESRM
HGHDSAFDAPPGASEDRVSLSPSESLFQDQDDPSMILEREDGRSNSHDGLAAGFEILDDR
SRTILQRRWLEDEKSTLHELADEYGVSAERIRQIEKAAMKKIKSHLMAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgccctgactgctgaaaaaaacaccatgccgattccggtcatcactgatgat
ctgaatagctatctggccaagattgccaatatcgatcttctgaccgttgaagaggagcag
attcttgctcgtcgtctgcgcaacgacgaggatttggatgctgcccgacagctagtcatg
tcccaactacggtttgtggtgcatattgcacgaacctacaagggctatggcctgccgatg
gctgacctggttcaggaaggtaatataggtctcatgaaagcggtcaagcgatttgacccc
gatgtcggtgtgcgcctgatttcttttgctgttcactggattcgtgctgaaattcatgaa
tacgtgatccgtaactggcgcatcgtcaaggttgcgactaccaagtcacagcgcaaactg
ttcttcaagctgcgaagcgccaagaagcagctcaactggttcagccaggaagaagtcgaa
gctgttgcggctgacctgggtgttgatgccaaggttgttgttgaaatggaatcgcgaatg
cacgggcatgacagtgctttcgatgcgcctcctggcgccagcgaagaccgtgtcagcctg
tctccatcggaatctctgtttcaggaccaggatgatccatccatgattctggaacgcgaa
gacggtcgaagcaattcgcatgacggtctggccgctggttttgaaattctggacgatcgt
agccgtaccatccttcaacgtcgttggttggaagatgagaaatcaacgctgcacgagctg
gctgatgaatacggcgtatctgccgagcgtatccgccagatcgagaaagcggccatgaag
aagatcaagtcccacctgatggcggcctga
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