Granulosicoccus antarcticus: IMCC3135_05280
Help
Entry
IMCC3135_05280 CDS
T04938
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IMCC3135_05280 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gai03400
]
IMCC3135_05280 (mutM)
Enzymes [BR:
gai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
IMCC3135_05280 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IMCC3135_05280 (mutM)
DNA repair and recombination proteins [BR:
gai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IMCC3135_05280 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ASJ71169
UniProt:
A0A2Z2NJ26
LinkDB
All DBs
Position
complement(1229293..1230105)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIKPHLVGKTIQQVTVHNPNLRWPVPTTIKALQGAIVASVTRRGKYLL
VDVPAGTAIVHLGMSGSLRISPADEPRRKHDHIELLLESGDILRFHDPRRFGCFLWAAAG
EPPHKLLASLGPEPLANEFNAEYLFQASRKRQVPIKNFIMNSQIVVGVGNIYASESLFMA
GIRPARAAKTLTRKQAEALVEAIKLVLQRSITQGGTTLRDFTNSDGNPGYFAQSLQVYGR
TDEPCRKCRKPIKQSVIGQRSTFYCSHCQK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgccagaagttgaaactacccgtcgcggtatcaagccacacctggtcggc
aagactattcagcaggtgacggttcacaatccgaatttacgctggccggtgcccaccacc
atcaaggcgctgcaaggcgccatcgtggcctcggtcacccgacgcggcaaatatttactg
gtggacgttcccgccgggactgccattgttcacttgggcatgtcaggcagcttgcgtatc
agtcccgccgatgagcctcgacgtaaacatgaccatatcgagctactgctcgaatccgga
gacattctgcgcttccatgacccacgccgctttggctgctttctgtgggcagccgccggc
gagccaccacacaaactgctggccagtctggggcccgaacctctggccaatgaattcaat
gccgagtatctgtttcaggcaagtcgcaagcgacaagtcccgatcaagaatttcatcatg
aacagccagattgttgttggcgtaggaaacatctacgccagcgaatccctcttcatggca
ggtattcgacctgcccgggcagccaagaccctgacacgcaaacaggccgaagcattagtc
gaggccatcaaactggtattgcaacgctcgatcactcagggaggaaccaccttgcgagat
tttacgaacagcgatggcaatccgggctactttgcgcagtcactacaagtgtatggacgc
actgacgaaccttgtcgcaaatgccgaaaacccataaaacaaagtgtgatcgggcagcgc
tcaacgttttattgcagtcattgccagaaatga
DBGET
integrated database retrieval system
