Granulosicoccus antarcticus: IMCC3135_07050
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Entry
IMCC3135_07050 CDS
T04938
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IMCC3135_07050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gai03400
]
IMCC3135_07050
Enzymes [BR:
gai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IMCC3135_07050
DNA repair and recombination proteins [BR:
gai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IMCC3135_07050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ASJ71516
UniProt:
A0A2Z2NJN3
LinkDB
All DBs
Position
1615644..1617140
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AA seq
498 aa
AA seq
DB search
MITANIQYAADFNGWRVQARLMLDAEIEPAQVIWQIAGASSDLFASQNELTIQADTVAQP
RRQGRENTQLVPREFIALAEKVVCHCDESRFALLYRVLWRMTHGEAGLLQRITDDDVHAL
TGFAKAVSRDRHKMTAFVRFRKTLGCEHEHYSAWFEPSHHILRLTSRFFCKRFANMDWSI
YTPEGSAHWNQSELVFGPPGTRTDIPDGEIMEQLWCTYFSNIFNPARLRLDAMRSEMPVK
YWKNLPEAPIIAKLTREAGARTSRMVEAAPSAEPRFAKAALYRGSEKAITPSGSLNELRE
SASNCCQCAHACDATQTVFGTGPEAARIMIVGEQPGDIEDLQGRPFVGPSGKLIRSMLDE
LSIDQDGLYFTNAVKHFKYTIRGKKRLHQSPSAGDIDHCRPWLLGEIALIKPLMIIALGR
TAASSLLGRVVQLEKERGALQSFGESGHIMVTHHPARILRATNKADRTRFKTQLLADLGM
AASSLQLPEDRAGMLALH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgcaaatatccagtatgcagccgatttcaatggctggcgagtacaggcccgg
ttgatgctcgacgcagagattgagcccgcacaggtaatctggcagattgcaggggcatca
tcagacttgtttgcaagccagaacgaattaacgatccaggcagatacggtggcacagccc
aggcggcagggtcgtgaaaatacccaattggttccgcgggagtttatagctctggcggag
aaagtcgtctgccattgtgatgagagtcgcttcgcgctgctctaccgggttctctggcga
atgacacacggtgaggcaggattgctgcaacggatcaccgatgatgatgtacacgccctg
acagggtttgccaaggcagtctcgcgagatcggcacaagatgactgcgttcgtgcggttt
cgcaaaacactgggctgcgagcatgaacactacagcgcctggtttgaaccctcccaccat
attcttcgtttaaccagtcggttcttctgcaaacggtttgcaaatatggactggtcaatt
tatacgcccgaagggagcgcgcactggaatcagtctgaattggtgtttggtccgccaggg
actcgaacagacattccagatggcgagatcatggagcagctctggtgtacctatttttcc
aatattttcaatccagcacgtttgcgactggatgcgatgcgatccgaaatgcccgtcaaa
tattggaagaatctgccagaagcgcccattattgccaagcttacccgtgaagctggagcg
cgaaccagtcgcatggtggaagcggctcccagtgccgaaccacggtttgccaaagcggca
ctttaccgaggctcagagaaagccatcaccccttcgggttccctgaacgagttgcgagaa
tctgcaagcaactgttgccaatgcgctcatgcttgcgatgcgactcaaacggtgttcgga
accggccctgaggctgcgcgtatcatgatcgttggtgaacagccgggggatatcgaagat
ctgcaaggcaggcctttcgtggggccgtcaggcaagttgattcgttcgatgctggacgag
ctttcaatcgatcaggatggcctctatttcactaatgccgtcaaacatttcaaatatact
attcggggaaaaaaacgccttcatcagagcccgtcggcgggggatattgaccactgccgc
ccctggctattaggggaaatagccttgattaaaccgttgatgattattgccctgggccga
accgctgcgagttcgctgcttggcagagtggtccagctggagaaggagcgtggtgccctt
cagagctttggagagtcgggccatatcatggtgacacaccatcctgccagaattctgcgc
gcaaccaacaaggctgatcgcactcggttcaagacacaattgctcgctgatcttggcatg
gccgcatcctctttgcagttaccagaagacagggcaggtatgcttgccttacactga
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