Granulosicoccus antarcticus: IMCC3135_07100
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Entry
IMCC3135_07100 CDS
T04938
Symbol
fadN
Name
(GenBank) putative 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai00071
Fatty acid degradation
gai00362
Benzoate degradation
gai00650
Butanoate metabolism
gai01100
Metabolic pathways
gai01120
Microbial metabolism in diverse environments
gai01200
Carbon metabolism
gai01212
Fatty acid metabolism
Module
gai_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
IMCC3135_07100 (fadN)
09103 Lipid metabolism
00071 Fatty acid degradation
IMCC3135_07100 (fadN)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
IMCC3135_07100 (fadN)
Enzymes [BR:
gai01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
IMCC3135_07100 (fadN)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
F420_oxidored
NAD_binding_2
DAO
ApbA
NAD_Gly3P_dh_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
ASJ71526
UniProt:
A0A2Z2NJP3
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All DBs
Position
1625746..1628040
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AA seq
764 aa
AA seq
DB search
MFKQIAVIGSGTMGAGIAGQIANAGHRVLLLDLPGEDEANAISSAALARLIKSEPPALMH
ADAAQLITVGNIRDDFDKLATADWIVEAVVERLDIKRALYQKLNEVIPADCIVTSNTSTI
PISLLVETMPESFRRRFAITHYFNPVRYMRLLELVRGSDAAVMQKLADFNDRELGKGVVA
CNDTPGFLGNRVGVFALQAGIDEAQSLQLPIEYADALMGRPMGIPKTGVFGLYDLIGIDL
MADVVRSLRSILPAGDAFHAVGAESDMINGMVNQGLTGNKGGGGFYRRDSDGKRLARDLE
TGEYRPAMAELPARALAAAEAIADQREPLVDLVAGSDVQAQFCQNVLGRVLGYAASLLGE
VTDSAQDIDDAMKLGFNWIRGPFEMIDALGSDKVIELLSATGASIPASLRSDKPFYAVSE
NVLTVRHANGDMDPIALPDGVVRFHMQRRVNAPLYSNRAASVFAIENGYRLIEFHSKANA
LTDESMQMVAQAASDHGRGILVHNDAQHYSAGVDLNAFLTLIDAGDWQGIDEFLARFQNA
VAALKYAPVPVVGAPSGLALGGGFEVLLHCDARVMHSNSVVGLVESGVGVLPAGGGVKET
YWRWYQKTGNWEKAAWKAWMNLGYGAMASSPQLAQKLQYFDPEIDVSLMNRDRLYQRSVQ
MLDTLTTGYVAPEASQFQLAGGDILERMGTFMDEGVARGDFYPHDKTVAMQIASVMCSED
GQSVEVSEQDLYDRERAAFIRLAQTPETRARIYSLLHAGGAVRN
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagcaaattgcagtcattggttcaggcaccatgggcgccggaatagccggacag
atagccaacgcgggccatcgcgttctcttgttggacctgccaggggaggacgaggcaaat
gccatcagttcggcggcactggcccgactgatcaaatccgagccgccggcattgatgcat
gcagatgctgcacaactgattaccgtcggcaatatccgagatgattttgacaagctcgcc
acggcggactggatcgttgaagccgttgttgaacgtctggatatcaaacgggcgttgtat
cagaaactcaatgaggtcataccggcagattgtattgttacttccaatacatcgaccatc
cccatcagcctgctggtggaaaccatgcccgagagttttcggcgtcggttcgcgataacg
cattatttcaacccggtgcgctacatgcgattgctggagctggtacgtggcagcgatgcc
gctgtcatgcagaagctggctgatttcaatgaccgtgagctgggcaaaggcgtggttgct
tgcaacgacacgcccgggtttctcggtaatcgcgtcggtgtcttcgccttgcaggcaggg
attgatgaggcgcagtctctgcagcttcccatcgagtatgccgatgccttgatggggcga
cccatgggcattcccaagacgggcgtattcggattgtatgatttgatcggcatcgatctg
atggctgatgtcgtccgttctctacgcagcattttgcctgcgggtgatgcctttcatgcg
gtgggtgctgagagcgacatgatcaacggcatggtgaatcagggtctgacaggcaataaa
ggtggaggcggcttctatcggcgtgattctgatggcaagcgtctggccagagatctggaa
accggtgaatatcggcctgcaatggctgagttgcccgcgcgggctctggcggcagcagag
gctatcgccgatcaacgtgagccgcttgtcgacctggtggctggtagcgatgtgcaggcg
cagttctgccagaatgtgctgggacgagtactcggatatgcggccagtttgctgggagag
gtgaccgattctgcccaggatattgatgatgccatgaagctgggtttcaactggattcgt
ggtcctttcgagatgattgatgcgctgggttcagacaaggtcatagagctgttgtcagca
acaggggcgagtattcccgcatcgttgcgtagtgacaaaccattctatgccgttagtgag
aatgttctgactgtccggcatgccaacggtgatatggatcccattgcattgccagatggc
gtggtccgtttccacatgcagcgacgcgtcaatgcaccgctatacagcaaccgtgcggct
agtgtgtttgccatcgaaaacggttatcgtctgatcgagtttcattccaaggccaacgcg
ctgacagatgagtcgatgcagatggtggcgcaggctgcgagtgatcatgggcgtggcatt
ctggtgcataacgatgcccagcactattcagctggagtcgatctgaatgcttttctgaca
cttatcgatgccggcgactggcaggggatcgatgagtttctggcacgatttcaaaacgcc
gttgctgccttgaaatatgccccggtgccggttgtgggcgcaccctcgggtctggcattg
ggaggcggtttcgaagtgcttctgcactgcgatgccagggtcatgcatagcaatagcgtg
gtagggcttgtcgaaagtggagtgggggttctgcccgccggtggcggtgtcaaggaaacc
tactggcgttggtatcagaagacgggaaactgggagaaggctgcctggaaggcatggatg
aacctggggtatggggcgatggcatcgtctccacagctggcacaaaaactccagtatttt
gaccccgagatcgatgtctctctcatgaatcgtgatcgcctgtaccagcgttccgttcag
atgctggacaccttgactactggttacgttgcgcccgaagcatcacagttccaactggcc
ggtggggatattctcgagcgtatggggacattcatggacgagggggtcgctcgcggtgat
ttctatccacacgacaaaacagttgccatgcagattgccagtgtcatgtgcagtgaggat
ggtcagtctgtagaggtcagcgagcaggatttatatgatcgtgaaagagctgctttcatc
aggcttgctcagacacctgagacacgcgctcgcatttattctctgctacatgcaggtggc
gctgtacgcaattag
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