Granulosicoccus antarcticus: IMCC3135_08205
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Entry
IMCC3135_08205 CDS
T04938
Symbol
uvrA_1
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
gai
Granulosicoccus antarcticus
Pathway
gai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IMCC3135_08205 (uvrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gai03400
]
IMCC3135_08205 (uvrA_1)
DNA repair and recombination proteins [BR:
gai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IMCC3135_08205 (uvrA_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IMCC3135_08205 (uvrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_29
SMC_N
AAA_16
AAA_21
RsgA_GTPase
AAA_25
AAA_23
AAA_33
nSTAND1
AAA_22
NACHT
AAA_18
AAA_14
nSTAND3
UvrA_DNA-bind
Viral_helicase1
AAA_15
ATPase
NB-ARC
DnaJ_CXXCXGXG
DUF4350
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ASJ71744
UniProt:
A0A2Z2NX67
LinkDB
All DBs
Position
complement(1883502..1889024)
Genome browser
AA seq
1840 aa
AA seq
DB search
MSKHILIENAYQNNLKHLDLKLPYGELIVITGVSGSGKSTLAFDTIYAEGQRRYVETFSP
YARQFLDRMDKPQVDRIEGIPPAIAIDQTNPVRTSRSTVGTMTELNDHIKLLFARTARLY
CGDCGKPVTRDTPEKISNDWFDQSEPRRIMVTFQVPIPANFSADEIQDWLARQGYTKVHQ
QSDTSIDVIQDRLSTREDNRSRFIEAIEAGLRYGQGKVSVHTLDEERQSSGQTSYSTALQ
CEACGIRYREPIPSSFSFNSPIGACESCKGFGRIIGIDYRLALPDVSKTLKGGAVKVFQS
ESGAACQRDLERAAKKQGIPLDVPFDEMTSTQQNWVIQGDGSEAENSWYGIKGFFDYLER
KSYRMHVRVMLAKYRSYDECPACHGARLKPASLNWRVGTLEDAARVIEPGARYRDAQAPF
SDKVMATLPGLNIVDLMQLPLSRALQFVEAIAQGHVDDPTDMVVREMRSRLAYLNDVGLS
YLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHAQDMDRVIRVLKRLRD
AGNTLIVVEHDPQLMLAADRIIDIGPGPGRAGGNIVFNGKPAALLKSKKSLTAKYLNGEK
TLNFSSPERGSRGTEKLILSGANGHNLQDVTLEIPLNRLVCLTGPSGSGKSTLIQDTLFN
ALTSLKGKPKDLALPYTAITGDEQITDVILVDQSPIGKSARSNPVSYTGAFESIRKLFEK
VPEAQERGYKASAFSFNSGMRCPACSGNGFEHVEMQFLSDVYLRCAECQGRRYRAELLEI
KLFNQSEAEGQSIADVLEMTVERALEFFAENKAVITALSPLREVGLGYLQLGQPVPTLSG
GEAQRLKLAAYLGQAAMIRSKRTIDGHTLFLFDEPTTGLHFEDIGKLLNAFEQLVEQGHS
LVVIEHNLDVIANADWIIDLGPAGGDAGGKIVCKGTPVQVMAHKTSVTAASLRDYRDATD
RLKATGIAEIAAPDPLQLINTDPGDAIVVHKAREHNLKNIDVRIPRDKMTVITGMSGSGK
STLAFDIVFNEGQRRYLESLNAYARQFVQPASRPDVDAITGIPPTVAIEQRTSRGGRKST
VATMTEIYHFLRLLFVKLGVQHCPDCEVPISAQSVDAITAQVLKQHRGKKINLHAPLIVN
RKGYYTDLAKWALNKGFTTLRVDGKALPTTEWPRLDRFKEHTIDLPVGTFMVDVKHEAEL
QALIQRAIDYGSGVVKISSASGREKLFSTQRACPSCQRSFAELDPRMFSYNSRHGWCESC
FGTGEVIPGFDEEQTGEERSWSNSDEDPVTCPQCEGQRLKSESLAVYFQDWNIADYTTLS
IVDAGKVFSSIKLNDREATIARDSLKELNSRLSFLVEVGLEYLSLDRAAPTLSGGEAQRI
RLAAQLGSNLQGVCYILDEPTIGLHPRDNRMLLDTLARLLKKGNTIVVVEHDEETILSAD
HIIDIGPGAGVRGGEIVASGTVAKVRKNPDSVTGRLLDHPLQHPLYPTRTGPEHSLHVTN
AHLHNLKNVSVDIPLGQLVCVTGVSGSGKSTLIRDVVHDNLRVLNAQKSKRKLGTLVGCE
DISGWESISRLLEVDQTPIGKTSRSCPATYIGFWDNIRRLFADTTEARIRGYNASRFSFN
TGDGRCEECAGQGMQRIEMSFLPDVRVLCEVCNGMRFNHETLSVRYKDKSIGDVLMMNVD
EGVEFFDAHVSIRHALKLLQDVGLGYLTLGQQSRTLSGGEAQRIKLVTELSKAKPSVRDS
SGKAIVNVHTLYILDEPTVGLHMADVENLIHVLHRLVEAGNSVIVIEHNLDIMAEADWII
DMGPEGGTGGGKVVARGTPKKVSMSKRSRTAPYLQQILSQ
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcacatactgatcgagaatgcctatcagaacaatctgaagcacctggatctg
aaactgccgtacggtgaattgattgtcatcaccggtgtcagcggcagcggcaaatccact
ctcgctttcgacacgatctatgcggaaggccaacggcgttatgtggaaacattctcgccc
tatgcccggcagtttctggacaggatggataaaccgcaggtggaccggatagagggtatc
ccacccgctattgccatcgaccagaccaacccggtgcgcacctcccgttcgaccgttggc
accatgacggaactcaatgatcacatcaagctcctgtttgctcgtactgccagactttat
tgcggagattgtggaaaaccggttacacgcgacacgccggagaaaataagcaacgactgg
ttcgaccagagcgaaccacgccgcatcatggtgaccttccaggttccgattccagcaaat
ttttcagcagacgaaatccaggactggctggccaggcaaggctataccaaggtccatcaa
caaagtgacaccagcattgatgtcatccaggacagattgtcaacgcgtgaagataatcgc
agtcgtttcatcgaagctatcgaagctggcttgcggtatgggcaaggtaaagtcagcgta
catacgctggatgaagagcgtcaatcctcaggccaaaccagctattcgacagctttgcag
tgcgaagcctgcggcatccggtatcgagaaccgattccttcgagcttttccttcaactcc
cccatcggggcctgtgagtcatgcaagggctttggccggatcatcggtatcgattacaga
ctggcgttaccagatgtcagcaagacgctcaagggcggtgccgtcaaggtattccagagc
gaatcaggtgccgcttgtcagcgggatctggaacgagctgcaaaaaaacagggcattcca
ctggatgtaccgttcgacgagatgaccagcacccaacagaactgggtcatccagggcgac
ggcagtgaggccgagaatagctggtacgggatcaaaggcttcttcgactacctggaacgc
aaatcctatcgcatgcatgtgcgagtaatgctggccaaataccgcagctatgatgagtgc
ccagcctgtcatggggccagactgaaaccagcctcactgaactggcgtgtcggaacgctg
gaggatgctgcgagagtcattgaacccggtgcacgctaccgtgatgcgcaagcccccttt
tcggacaaggtcatggcgacactaccaggcctgaatatcgtggatctcatgcagctgcca
ctgtccagggcactgcagttcgtcgaagcgatcgcccagggccatgttgatgatcccaca
gacatggtggtgcgcgagatgcgctcgcgactggcctacctgaatgatgtgggcctgagc
tatctgaccctcgatcgccagtcacgcaccctgtctggtggcgaggtgcaacgtatcaat
ctgacgacagccctcggtacttcactggtcaatacgctgttcgtgctcgacgagcccagc
atcgggctacatgcacaggacatggatcgggtcatccgggttctgaaacgactgcgtgac
gccggcaacacgctcatcgttgtagagcacgatccgcaattgatgctagccgccgatcgc
atcatagacataggcccgggtccaggtcgcgccggcggcaacattgtcttcaacggcaag
cctgccgcactgttgaaaagcaagaaatcactgacagccaaatacctgaacggtgaaaaa
actctgaatttctcgtcccccgaacgtggtagtcgcggtactgaaaaactcatactcagc
ggtgccaacggccataatctgcaggatgtgacgctggagattccgctgaatcgtctggtc
tgcctgacaggccccagcgggtcaggcaaatcgactctcatccaggacaccctgttcaat
gccctgacatcgctcaagggcaaacccaaggacctggcacttccctataccgccatcacc
ggcgatgaacagatcaccgatgtaatactggttgatcagtcacccatcggaaaatcggct
cgttccaacccggtcagctacaccggcgctttcgaatccattcgcaagttattcgaaaaa
gtacctgaggctcaggagcgtggttacaaggccagtgctttcagtttcaactctggcatg
cgttgtccggcctgctcgggtaatggattcgagcatgttgaaatgcaattcctctctgat
gtctatctacgttgcgccgaatgccagggacgtcgataccgcgcagagttgctggaaatc
aaactcttcaaccagagcgaggccgaaggtcagtcaattgcagacgtactggaaatgacc
gtcgaacgtgcactcgaattctttgcagagaacaaagcggtcatcacagcactcagccct
ctgcgagaggtgggcctgggctatctgcaactgggccagcccgttcccaccctcagcggt
ggtgaagcacagcgcctgaaactggcagcctatctgggacaggctgccatgattcgatcc
aaacgcaccattgatggccataccctcttcctgtttgatgagccgactaccggcttgcac
ttcgaagacattggcaagttgctcaatgccttcgaacaactggtggaacagggacactca
ctggtggtgatcgagcacaatctggatgtcattgccaacgcggactggatcatcgatctt
ggtcctgccggtggagatgccggcggcaagatcgtctgcaagggcacccccgtgcaagtc
atggcccacaagaccagtgttaccgctgcctctctgcgtgattacagagatgccactgat
cgcttgaaagccacaggtatcgccgagatagcagcgcccgatcccttacagctgatcaac
actgatcccggcgacgccatcgtcgtgcacaaggcccgcgaacacaatctgaagaatatc
gacgttcggattccacgcgataaaatgacggtcatcaccggcatgagtggcagtggcaag
agcacactcgcttttgatatcgtcttcaacgaaggtcagcgtcgttatctggaatcgctg
aatgcctacgctcggcaattcgtgcaacccgcctccagacccgatgtcgatgccattacc
ggcatccctcccacggttgccatcgagcagcgcaccagtcgcggcggccgcaagagcacg
gtcgccacgatgaccgagatctatcacttcctgcgcctgctgtttgtcaaactgggtgta
cagcattgccccgactgcgaagtccccatatcggcacaatcggttgatgccatcaccgct
caggtgctcaagcagcatcgtggcaagaagatcaatctgcacgcgcctctgattgtcaat
cgcaagggctattacaccgatctggccaaatgggcattgaacaagggctttacgacactg
cgtgtcgacggcaaggcactgccaacgaccgaatggccgcggctggaccgcttcaaggaa
cacaccattgatctgccagtgggcactttcatggtcgatgtgaaacacgaagccgaacta
caggcattgatacagcgagccatcgattatggtagcggtgtggtcaagatcagcagtgcc
agcggtcgcgaaaaactattctcgacgcaacgggcctgcccgagctgccagcgcagcttt
gccgagctggatccgcgcatgttttcctacaactcccggcacggctggtgtgagagctgc
tttggcaccggtgaagtgatccccggctttgacgaagaacagaccggcgaagagcgtagc
tggtcgaacagcgatgaggatccggtcacctgtccacagtgcgaaggccagcgcctcaag
agcgaatcactggcggtgtactttcaggactggaacattgctgattacaccactttatcg
attgtcgatgccggcaaggtgttttcgagcataaagctcaatgatcgagaagcaaccatt
gccagagacagcctcaaagagctgaactctcgcctgtccttcctggttgaagtcggtctg
gagtacctatcgctggaccgggctgcaccgaccttgagcggtggcgaagcacaacgcata
cggttagcggcacagctgggctcgaacctgcagggtgtgtgctacatcctcgacgagcca
accatcggattacatccacgcgataatcgcatgttgctcgatacgctggcgcgattgctg
aaaaaaggcaataccatcgtcgtggtagagcacgacgaggaaaccattctcagtgccgac
catattatcgacatcggcccgggtgccggtgtgcgtggcggtgaaatagtggcctcgggc
actgttgccaaagtacgtaaaaatccggattcagtcactgggcgcctactggatcaccca
ctacaacatccgctctatccgactcgtaccgggcctgagcacagcctgcatgtgactaac
gcgcacctgcacaacctgaagaacgtctcagtcgatataccgctgggccaactggtttgt
gtcacgggtgtttcaggctcgggcaaaagcacgctcattcgtgatgtcgtgcacgacaac
ctgcgggtactgaacgctcagaaaagcaaacgcaagcttggcactctggtcggttgtgaa
gatatctctggctgggagagtatttcccgtctgctggaagttgatcagacccctatcggc
aaaacatctcgctcctgcccggctacctacatcggcttctgggacaacatcagacgcctt
ttcgccgatacgaccgaggctcgcattcgtggctacaatgccagccgcttctcgttcaat
accggcgatggtcgctgtgaggaatgcgccggacaaggcatgcaacgcatcgagatgagt
tttctgcccgatgtccgcgtactgtgtgaagtctgtaacggcatgcgcttcaatcatgaa
accctctccgtacgctacaaggacaaatccatcggtgatgttctgatgatgaatgtcgat
gaaggcgtcgagttttttgatgcacatgtcagcatccggcatgccctgaagttgctgcag
gatgtcggcctgggctacctgacgctcggtcagcaaagccgaacactcagcggtggcgag
gcgcagcgaatcaagcttgtcaccgagctgtcaaaggccaaaccctctgtccgtgactcc
tcgggcaaggccatcgtgaacgtgcacacgctctacattctggacgaacccacggtgggc
ctgcacatggctgatgtggagaatctgattcacgtactgcatcgattggtggaagccgga
aactcagtcattgtcatcgaacacaatctggatatcatggctgaggcagactggatcata
gacatgggtcctgagggcggtacgggaggcggtaaagtggttgcacgcggcactccgaag
aaagtttcgatgtcaaaacgctcacgaaccgccccctatctgcaacagatattgagccaa
tga
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integrated database retrieval system
