KEGG   Granulosicoccus antarcticus: IMCC3135_10985
Entry
IMCC3135_10985    CDS       T04938                                 
Symbol
rnj
Name
(GenBank) Ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
gai  Granulosicoccus antarcticus
Pathway
gai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IMCC3135_10985 (rnj)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gai03019]
    IMCC3135_10985 (rnj)
Messenger RNA biogenesis [BR:gai03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IMCC3135_10985 (rnj)
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6 CDC48_2 DUF8125
Other DBs
NCBI-ProteinID: ASJ72289
UniProt: A0A2Z2NM77
LinkDB
Position
complement(2467073..2468434)
AA seq 453 aa
MTPDASDFWFLPLGGCGEIGMNMNLYGHDDQWLMVDCGVTFRDADGSNRSGYHVQMADPG
FITERREQLQALLLTHAHEDHIGAVAHLWRKLRCPIYATAFTAEMLRRKLAEHGLVNKAV
ITLVEPGDRMRIGAFDVEWIPNTHSIPSPCGVAIRTSAGSAFHTADWKLDPNPVIGHHYH
ESIYRALGDSGIQAMVCDSTCADQPGHSLSESALYDGLHHHVTNATGRVVVACFGSNIAR
LHTLARIAKETGRHLGLLGRSLINTAGAAKASGLWPDIPTLVESDHLGYLPRESLLLVAT
GSQGEPRTALHRLSHDSFRDLALQEGDTVIFSARAIPGNESSIEMLIERLQARGIIIVTP
DTSELPIHASGHPGRQELEKLYSWVRPSLVIPVHGEPAHLDAQVDVAKSAGIARQLNGRN
GDLFVIGPNTSIRRNAVPVGRLGVGQKALEKIA
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgacacctgatgcaagtgatttctggtttctgcccttgggtggctgcggcgaaatcgga
atgaacatgaacctttacggtcacgacgaccagtggctcatggtggattgcggtgtcaca
ttccgtgacgctgatggtagcaaccgcagtggctatcacgtacagatggccgaccctggc
ttcattacagagcgacgtgagcaactccaagccctgctgctcacacatgctcatgaggat
catatcggcgcggtagcccatttatggcgcaagctgcgttgtccaatctatgcgacggct
ttcacggcagaaatgttacgacgcaagctggcagagcacggtctggtcaacaaggccgtg
atcacgctagtcgagcccggagaccgcatgcgtatcggtgccttcgacgtggaatggatt
cccaacacccactcaatccccagcccatgcggtgttgcaattcgtacctcggcaggcagc
gctttccataccgcggactggaagctggaccccaaccctgttattggccatcactaccat
gagtcaatctaccgggcattgggcgactcggggattcaggccatggtctgtgattcaacc
tgtgcagatcagcccggacattcactatctgaaagcgcgctctacgatggactgcatcat
catgtcactaacgcgactggccgagtggttgtcgcctgcttcggcagcaacattgcacgc
ctgcacacgctcgcaagaatagccaaagagaccggacgacatctgggcttgctgggccga
tctctcatcaatacggcgggtgccgccaaggctagcggcttgtggccggacattcccaca
ttggtcgagtcggaccacctgggctatctgcctcgtgaatccttgctactggtggcaaca
ggtagccagggtgagcctcgcacggcactgcatcgactcagccacgacagcttccgggac
ctggcactgcaggaaggagataccgttatcttcagcgccagagctattccgggtaacgaa
agttctatcgaaatgcttatcgagcgcctacaagctcggggcatcatcatcgtgacaccg
gacacctctgagctgcctatccatgcatccggacatccgggcagacaggaactggaaaaa
ctctacagctgggtcagaccatctctggtaattccggtacacggcgagcccgctcatctt
gatgcccaggtcgatgtcgccaagtcagctggtattgcccgccaactcaatggccgcaat
ggtgatcttttcgtgattggccccaatacgtcgattcgacgcaatgccgttccagtcggt
cgactcggcgtaggccagaaggctcttgagaagatcgcctga

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