Granulosicoccus antarcticus: IMCC3135_11230
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Entry
IMCC3135_11230 CDS
T04938
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gai
Granulosicoccus antarcticus
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gai03016
]
IMCC3135_11230 (truB)
Enzymes [BR:
gai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IMCC3135_11230 (truB)
Transfer RNA biogenesis [BR:
gai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IMCC3135_11230 (truB)
Prokaryotic type
IMCC3135_11230 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ASJ72336
UniProt:
A0A2Z2NLX7
LinkDB
All DBs
Position
2524218..2525195
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AA seq
325 aa
AA seq
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MSRRNRKGRAVHGILLLDKPAGGSSNHALQRAKRVFGAKKAGHTGSLDPLATGMLPICFG
EATKLSAFLLDADKGYETTLQLGVTTNSADADGEVLETRPVPTELTLESFTEICNRFKGP
LQQIPPMVSAIKIDGQRLYKLAREGKEVERPPRAITIHELEVLEFTGTTARLAVRCSKGT
YIRSLVTDIGEAIGCGAHVAALRRTFVSPFDASFPMVTLETLEQMASAAGTDDEANVEQF
DELLLPLDAGLAHLPSVAIDETGEAAFQRGQSAICLVSDLTHSNQSALDVDVPCRVYDAA
GRLVGLGELTESGEQVAPRRVLQWE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgtcgaaatcgcaagggccgtgcggttcacggcatcctattgctggacaagcct
gccggtggcagctcgaaccatgcattgcaacgagccaagcgggtattcggagcgaagaag
gcaggtcataccggcagtctcgatccgttggcaaccggcatgctccccatctgtttcggg
gaagcaaccaagctcagtgcgtttttgcttgatgctgacaagggctatgagaccactctg
caactgggtgtgacaacgaattcggcagatgctgatggtgaggtgcttgagacacgcccg
gtacccactgagttgacgctggaatcctttaccgaaatctgtaatcgtttcaaggggcct
ctgcagcagataccgccaatggtgtccgctatcaagatcgatggtcagcggctgtacaag
ctggcgcgcgaaggcaaggaggtggagcgaccacccagagccatcaccattcacgagctt
gaagtgcttgaattcaccggcaccactgcacgcctggctgttcgttgctcgaagggcacc
tatattcgatcactggtgacagatattggtgaggcgattggctgtggagctcacgtagcg
gcactgcgacgcactttcgtatcaccgtttgatgcctcatttccgatggttacgcttgag
acgcttgagcaaatggcaagtgcggctgggaccgatgatgaagcgaatgtcgagcagttc
gatgaattgctgttgccgctggatgcaggtctggctcatttgccgtctgttgccatcgat
gagacaggtgaggcagcctttcagcgcgggcaatccgctatttgcctcgtcagtgatctg
acacattccaatcagtctgcactggatgttgacgtgccttgtcgggtttatgacgcggca
ggtcgactggtgggactgggagagttgacagaatctggtgaacaagtcgcaccccgtcga
gtgcttcaatgggagtga
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integrated database retrieval system