Granulosicoccus antarcticus: IMCC3135_11725
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Entry
IMCC3135_11725 CDS
T04938
Symbol
rng_1
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMCC3135_11725 (rng_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gai03019
]
IMCC3135_11725 (rng_1)
03009 Ribosome biogenesis [BR:
gai03009
]
IMCC3135_11725 (rng_1)
Enzymes [BR:
gai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
IMCC3135_11725 (rng_1)
Messenger RNA biogenesis [BR:
gai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IMCC3135_11725 (rng_1)
Ribosome biogenesis [BR:
gai03009
]
Prokaryotic type
rRNA processing factors
IMCC3135_11725 (rng_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ASJ72435
UniProt:
A0A2Z2NPP2
LinkDB
All DBs
Position
complement(2649255..2653031)
Genome browser
AA seq
1258 aa
AA seq
DB search
MKRMLINATHSEELRVAIVDGQRLVDLDIEHKSREQRKSNIYKAKITRVEPSLEAVFVDY
GADRHGFLPFKEIAKEFLNGSNKKTEGGRPSIRDCIKEGQEIVVQIEKEERSNKGAALTT
FISLAGRFLVLMPNNPRAGGVSRRIEGDDRSELKAAMSDVEVPAGMGTIVRTAGIGRTTE
ELQWDLDYQAAIWKAIQEAAGENKAPFLIYQESNIIVRGLRDYFRGDIGEIIADEATTYE
QAAEFIRLYMPQNERKLKMYQDDVPLFNRYQVESQIESAFRREVRLPSGGALVIDHTEAL
VSIDINSARATKGSDIEETATNTNLEAADEVARQLRLRDLGGLVVIDFIDMMDSKHQRAV
ENRLRDALKQDRARVQIGRISKFGLLEMSRQRLRPSLGESSENVCPRCQGHGTIRGIEST
ALSILRLVEEDAMKDNTGRVMADVPVEVATYLLNEKRQSITEIEARNNVVLLIVANPTLE
TPNYTIERIRMSEADHDMVTKKSYELASDNTETYSAQQEAREEKKPETAAVSAVSPLAPA
PTPARLQQQAVVPGPVQGPGGFRRILGAVTSLFGASSSSNESSADSTTEQNASGSKSANT
NARRNGNSDDESRGQKRGSRSGNRNGRGRSKQADGENGENGENGETSNESPRGGRNNQRR
AKNAEAPEGERKNPRGRGRGRKQENSANAEELPIAVDGEGEATDANAGKPENNKRSANGR
RSKRKVEQTTPENSDTVVIDAESAPTTTADGPANEQPANSEEGGRTRGRRGGRRRGGRGR
GKTNERDENGEIKESAANDADATVEPSANATGEHQQADNADAKGNNAEAVSIDDASAAMS
ESTEKAESVGEKAAITTATAVVDAPNEVIASSEEPANDTSAESTSETSETSETSDTSEAS
PTDRQKSSRQKGRRRSSKAAANDTAEDASAAEVVETAPAEPAAIESAEEPALVESVEAQP
AAVVSAEEPAPVESAEAQPATVEPVEEPAATESAEAKPAALEPVEEPAPVESAEAQAAAV
EPAEEPAPVESAEAQAAAVEPAEVPAPVETAEAKPAVIESAEEPAAVEPAEATEAEPAAI
SELDSEDPSDDSDDTGKPKRRGGGRRRERVNSKKAAAAKSPTPAETADSNDTTTTAEEST
KPEKHQPEPADISPVETSASEATTHVVTEESKVSQRQPSQLKSSVRSLANKDESGSGGGL
SLASKRVPDVIPASLGSKAVEVGNSEAATKAAVNDNTSQSSDEAIESNVKPTTEKLND
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttgatcaacgcaactcactcagaggagttgcgtgttgccatcgtcgat
ggtcaacgactagtcgatctcgatattgagcacaaatcccgcgaacaacgcaaatcaaat
atctataaagccaaaatcactcgcgtcgagcccagcctcgaagcggtctttgtagactat
ggtgctgatcgtcacggcttcctgcctttcaaggaaattgccaaagagttcctgaacggt
agcaacaagaagactgaaggcggacgccccagcattcgtgattgcatcaaggaaggccaa
gagatcgttgttcagatcgagaaggaagagcgcagcaataaaggcgctgccctgacgacc
ttcatcagcctggctggccgatttctcgttttgatgcctaacaacccccgtgctggcggt
gtttcacgtcgtatcgaaggagacgaccgctccgagctgaaggctgccatgtccgatgtg
gaagtcccggccggcatgggtactatcgtgcgtactgccggtatcggacgaaccactgaa
gaactgcaatgggatcttgattatcaggcagccatctggaaagccattcaagaagctgct
ggtgagaacaaagccccctttctgatctatcaggaaagcaacatcatcgtgcgcggtctg
cgtgactattttcgcggcgacatcggtgaaatcatcgctgacgaagcgaccacttatgag
caggcagcagagttcattcggttgtacatgccgcagaacgaacgcaagctcaagatgtac
caggacgatgtcccgttgttcaatcgctaccaggttgaatcccagatcgaatcggcattt
cgtcgtgaagttcgcctgccctccggcggtgctcttgtcatcgatcacaccgaagctctg
gtgtccatcgacatcaactcggcacgagccaccaagggatcagatatagaagagacagcg
accaacaccaacctggaagctgccgatgaagtcgcccgtcaattgcgactgcgcgacctg
ggcggcctggttgtcatcgatttcatcgacatgatggactccaagcaccagcgcgccgtg
gaaaaccgcctacgcgatgctctcaagcaagaccgtgcccgtgtgcaaataggccgaatt
tcgaagttcgggctgttggaaatgtccagacagcgtttacgcccgtcactgggagaatcc
tccgaaaacgtctgccctcgttgccagggccacggcaccattcgtggtatcgaatcaacc
gctctgtccattctgcgactggtggaagaagatgcgatgaaggacaatacgggacgcgtc
atggcggatgttcctgtagaggtcgcgacctatttgctcaatgagaaacgtcagagcatt
accgagatcgaggctcgtaacaatgtcgtcctgctgattgttgccaacccgactcttgaa
actccgaactacaccatcgaacgtatccgcatgtctgaagcggaccacgacatggtgaca
aagaagagctacgaactggcatctgacaacaccgaaacttactccgcacagcaagaagcg
cgagaagagaaaaagccggaaaccgcagcagttagcgcggtcagccctctggccccagcc
cccacccctgcccgactccaacaacaagctgtcgtccctggccccgtccagggaccaggc
ggcttcagacggatactaggtgctgtcacttccctgtttggagccagctcatcaagcaat
gagtcgtcagctgatagcaccactgaacagaacgcttcaggctcgaaatcggccaatacg
aatgctcgccgtaacggtaattcggatgacgaatcgcgaggccagaaacgcggatcacgt
tccggcaaccgcaatggacgtggacgttccaagcaagctgacggcgaaaacggcgaaaac
ggcgaaaacggcgaaacaagcaacgagtctcctcgtggcggacgcaacaaccagcgacgt
gccaagaacgcagaagccccagaaggagagcgcaagaatcctcgtggacgtggtcgtggc
cgcaagcaagagaacagcgccaatgctgaggaactgcctatcgctgttgacggtgaaggc
gaagccactgatgcgaacgctggcaaaccagaaaacaacaagcgatcagccaacggacga
cgctccaaacgaaaagtcgaacagacaacacctgaaaattccgacaccgttgttatcgat
gcggaatcagcaccaacaacgacggcagatgggccggccaacgaacagcctgctaattcg
gaagaaggcggtcgcacacgcggacgacgtggtggacgacgtcgtggtggtcgaggacga
ggaaagaccaacgagcgtgatgaaaatggtgaaatcaaagaatcagcggcaaacgatgcc
gatgcaacagtagaaccatctgctaacgccactggcgagcatcaacaagctgacaacgct
gacgcaaagggcaataacgccgaagctgtctcaattgatgatgcttctgctgcgatgtcg
gaatccacagaaaaagctgaatcagtcggcgaaaaagctgccattacgacagcaaccgct
gttgtcgatgctccaaatgaggtgattgcctcatccgaagagcctgctaacgatacgtct
gcggaaagcacatcggaaacatcggaaacatcggaaacatctgacacttccgaggcttcg
ccaaccgataggcaaaagagctctcgacagaaaggtcgcagacgttcttcaaaagcagct
gccaatgacacggcagaggacgctagcgcagctgaagtagttgagactgctccagctgaa
cctgctgcgattgaatctgcggaagaacctgctctcgttgaatccgttgaagctcaacct
gctgcggtcgtatctgcggaagagcctgctcccgttgaatccgctgaagctcaacctgct
acggtcgaacctgtagaagagcctgctgcaactgaatccgctgaagctaaaccggctgcg
ctcgaacctgtagaagagcctgctccagttgaatccgctgaagctcaagctgctgcggtt
gaacctgcagaagagcctgctccagttgaatccgctgaagctcaggctgctgcggtcgaa
cctgcagaagtaccagctccagttgaaactgctgaagccaagcctgctgtgatcgaatct
gcagaagagcctgctgcggttgaacctgcagaggctacagaagctgagcctgcagcgatt
tccgagcttgattcagaagacccttcggacgacagcgacgacactggcaaaccgaaacgc
cgcggtggcggacgacgtcgtgaacgagtcaacagcaagaaagcggcagctgcaaaaagc
cctacccctgcagaaacagctgactccaacgacacaacgactactgcggaagaaagtaca
aagcctgaaaagcatcaaccagagccggccgatatcagccctgttgagacgagcgcttca
gaagcaacgacacacgttgtaaccgaagaaagcaaagtgtcacagcgccaacccagccag
ctgaaaagctctgtacgatccctggccaacaaggatgagtctggctcaggtggtggcttg
tcgctagcgtccaagagggtgcctgatgtcattcctgcaagccttggcagcaaggcagta
gaggttggtaactctgaggcagccacgaaggcggcggtcaatgacaatacgtcacagagt
tcggatgaagccatagaaagcaatgtcaaacctacgactgagaagctcaacgactaa
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integrated database retrieval system
