Granulosicoccus antarcticus: IMCC3135_14140
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Entry
IMCC3135_14140 CDS
T04938
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMCC3135_14140 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gai03019
]
IMCC3135_14140 (recQ)
03400 DNA repair and recombination proteins [BR:
gai03400
]
IMCC3135_14140 (recQ)
Enzymes [BR:
gai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMCC3135_14140 (recQ)
Messenger RNA biogenesis [BR:
gai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IMCC3135_14140 (recQ)
DNA repair and recombination proteins [BR:
gai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IMCC3135_14140 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
GARS_N
DUF3613
Motif
Other DBs
NCBI-ProteinID:
ASJ72913
UniProt:
A0A2Z2NNV3
LinkDB
All DBs
Position
3234408..3236237
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AA seq
609 aa
AA seq
DB search
MQTHEMTSTDALEILQTIYGFDGFRGQQQEIVDTIIRGEDALVLMPTGGGKSLCYQIPSL
ARPGTGIIVSPLIALMQDQVDALRALNLNAAFINSSMNAQDVARTEQALLDGQIDMLYVA
PERLLMSGMLSLLDRCEIALFAIDEAHCVSQWGHDFRKEYMGLSLLSERYPTVPRIALTA
TADERTRKEIASNLQLTTAASFVSSFDRPNIRYAIGEPVNPRDAMLHFLDTHHEGEAGIV
YCLSRKKVEQTAEWLNKQGRTALPYHAGLPAEERQHNQTRFLREDGLIVVATIAFGMGID
KPDVRFVVHLNLPKSVEAYYQETGRAGRDGQPSNAWMAYGLQDVINLRSMMAQSDADEQH
KRLENHKLETMLGLAELTTCRRQSLLSYFGDTLVEPCGNCDNCLYPPHTWDATEAARKAL
SCVYRTGQRFGVTYVVDVLMGKVSERVTRFGHDRQSTFGIGKEYSANEWRNLFRQLIARG
LLAVDVEGHGSVLLTESARPVLKGEQTLHLRELVVGEGKKSRSVTRKKKALEDIADNDQP
LWNALRSLRKQLSDVAGVPAYIVFNDSTLVDMISIKPRDKSEMASVSGVGQHKLEQYGDD
FLDVIREHS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagacacatgaaatgacgtccacagacgcgctcgaaattcttcagacaatctacggc
ttcgatggttttcgaggccagcaacaagagattgtcgatacgatcattcggggcgaagac
gccctggtattgatgcccacaggcggcggtaagtccctgtgctaccagataccctccctg
gcccgtccgggtactggcatcatcgtctcaccgctgattgccctgatgcaggatcaggtt
gatgcgctgagggcgttgaatctgaatgctgccttcatcaactcatccatgaatgcgcag
gatgtggccagaacggagcaggcattgctggacgggcagatcgacatgctctatgtggcc
cctgaacgattgttgatgtctggcatgctgagtctgctggatcggtgtgaaatcgcgttg
tttgcgattgacgaggcgcactgtgtatcgcagtgggggcatgatttccgcaaggaatac
atgggcctgtccttgctttccgagcgctatccgacggttccacgtattgcactgacagcg
actgccgatgagcgcacccgtaaagagattgccagtaatctgcagctgaccacggcggcc
agttttgtcagtagttttgatcgccccaatattcgctacgcgattggcgagccggtcaat
ccacgtgatgccatgctgcattttctcgatacccatcatgagggtgaggccggtattgtc
tattgcctgtctcgcaagaaagtcgagcagacggcggaatggctgaacaagcaggggcgg
acagcgttgccctatcacgccggtctgccagccgaggagcgccagcataaccagacacgt
tttctgcgtgaagatggtctgattgttgttgccaccattgcctttggcatgggcatagac
aagcctgatgtacgctttgtcgtccaccttaacctgcccaagagtgtcgaggcctactac
caggaaacagggcgagcgggtcgtgatggacagccctccaatgcctggatggcgtatggc
ctgcaggatgtcattaacctacgttccatgatggcgcagtccgatgcagacgagcagcac
aaacggctcgagaatcacaagctggaaaccatgctgggactggctgagctgacaacctgc
cgacgtcagtcattgctcagctactttggcgatacgctggtagagccgtgtggcaactgc
gacaactgtctgtacccaccgcatacctgggatgccacggaggctgccagaaaggcgctc
tcttgtgtctaccggaccggccagcgttttggcgtgacttacgtggtcgatgtgctgatg
ggcaaggtgtccgagcgggttacccgattcggacacgaccggcaatccacctttggcatc
ggcaaggaatactcagcgaacgaatggcgaaacctgttccgacagcttatcgccagaggc
ctgctggccgtcgatgtcgaaggccacggctcggtcctgctgaccgaatctgctcgacct
gtgctcaaaggggagcagactctgcacctgcgtgagctggtggtgggcgagggtaagaaa
tcccgcagcgtcactcgcaagaaaaaagccctggaagatatcgccgataacgatcagcca
ctgtggaacgcgctaagaagcctgcgcaagcagctcagtgatgtagcaggggtgcccgcc
tatatcgtgttcaacgacagcacactggttgacatgatctccatcaagcctcgcgacaag
agtgaaatggcgagtgtctcaggtgtgggtcagcacaagctagagcagtatggtgatgac
tttctggatgtgattcgggaacatagttga
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