Granulosicoccus antarcticus: IMCC3135_16820
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Entry
IMCC3135_16820 CDS
T04938
Symbol
lcfB_3
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai00061
Fatty acid biosynthesis
gai00071
Fatty acid degradation
gai01100
Metabolic pathways
gai01212
Fatty acid metabolism
gai02024
Quorum sensing
gai04146
Peroxisome
Module
gai_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IMCC3135_16820 (lcfB_3)
00071 Fatty acid degradation
IMCC3135_16820 (lcfB_3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IMCC3135_16820 (lcfB_3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
IMCC3135_16820 (lcfB_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gai01004
]
IMCC3135_16820 (lcfB_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gai04147
]
IMCC3135_16820 (lcfB_3)
Enzymes [BR:
gai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IMCC3135_16820 (lcfB_3)
Lipid biosynthesis proteins [BR:
gai01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IMCC3135_16820 (lcfB_3)
Exosome [BR:
gai04147
]
Exosomal proteins
Exosomal proteins of breast milk
IMCC3135_16820 (lcfB_3)
Exosomal proteins of breast cancer cells
IMCC3135_16820 (lcfB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ASJ73446
UniProt:
A0A2Z2NPR8
LinkDB
All DBs
Position
3846804..3848342
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AA seq
512 aa
AA seq
DB search
MNQPHVSSPLSDAKSYLEGSPLKFHEAAMKWMRETPDHVALTDDTRQLTYGELGKAITDA
SDWLVGQGVRPGDRVAVVNENCITTAVFIFAVSAAGGIVAPVNARISQREMEVVLDRFAP
RCVLYTTDSPAAAEYAQSVNATPMNIEGVGQFSGIFDETAEPETGDLPGVVVFTSGTTGN
PKAVMQSHPSLLYQGASQVISRRLTSADSVYVVAPLSVSIGLGSNLMGAVVAGAEAILVL
RFTPAGLAKAIVNDLVTFVVAVPQVYAKLLDYADAEGMDLGSSSRLRVVGSGGASIDPAL
SRRIKSVFGLPCSNGYGCTEMTPIARTPDGMEASGDIIGVPSPGIEIKLMDKDGNEVPKG
EIGELWARGPSRMMGYYKNPEASAEVMVGDGWVRTGDLVRQGDTGAYHICGRSKELIIRS
GFNVYPIEVESVLNSFPGVMQSAVVGRKIEGDEEIVGFVQGIAGTTLNLEELRGYCRKNL
AGYKVPSEIFQEELPIGPSGKILKADLAKKIA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaacctcacgtatcttctccgctctcggacgccaaaagctatttggaaggttcc
ccattaaagtttcatgaagccgcgatgaaatggatgcgtgaaacacctgatcatgtcgcc
ctgaccgacgatacgcgacagttgacctacggcgagcttggaaaggcgatcaccgacgct
tctgactggttggtcgggcaaggcgtgcgaccgggtgaccgggtggcagttgtcaatgaa
aactgtattacgactgccgtgttcatttttgcggtcagcgcggctggcggcatcgtcgca
cccgtgaacgcccgaatttcccaacgcgaaatggaggttgtcttagatcgcttcgccccc
cgttgtgtcctttatacaaccgacagccccgccgctgccgagtatgcgcaaagtgtgaat
gccacgcccatgaacattgaaggtgttggtcaatttagcggtatttttgatgaaacggcc
gaaccagaaaccggtgatttgcccggcgtcgttgtgtttacgtcaggcacgacaggtaac
ccaaaagccgtcatgcaaagccatccgtcactgctttatcagggcgcaagccaagttatc
agtcgccggttaacgagtgcggactccgtctatgtcgtcgcgccgctgagcgtttcgatt
ggtttaggttcaaatttgatgggcgcagtcgttgctggcgctgaggcgatcctggtttta
cgatttacgcctgcagggctggcaaaagcgatagtgaatgacttggtaactttcgttgtg
gctgtccctcaggtctacgccaaacttctggattacgctgacgcagaaggaatggatctc
gggagcagctctcgtcttcgggtagtgggatctggcggagcatccatcgatccagccctt
agtcgtcggattaaatcggtcttcggcttaccgtgcagcaacgggtacggttgtaccgaa
atgacaccaattgcccgaacgccggacggtatggaagcctcgggagatataatcggtgtg
ccctccccgggtatcgaaataaagctgatggacaaagacgggaacgaggttcccaagggc
gagattggcgagctttgggcccgcggaccttcacgtatgatggggtactacaaaaacccc
gaagcatcggccgaagtcatggttggcgacggctgggtgcgcaccggcgatcttgtgcgt
cagggcgacaccggtgcctaccatatttgtggccgcagcaaagagctgatcattcggtca
ggattcaatgtttatccgatcgaggtcgaaagcgtgttgaattcttttccgggtgttatg
caatccgccgtggtcgggcggaaaattgaaggtgacgaggaaatcgtcggttttgtacag
ggtatcgcgggcaccactttaaatcttgaggaactgcgcgggtattgccgcaaaaacctg
gcgggatacaaagttccatctgagatttttcaagaagaactgccgattgggccatcgggg
aaaattcttaaggcggacctggcaaagaagatcgcttaa
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