Granulosicoccus antarcticus: IMCC3135_16840
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Entry
IMCC3135_16840 CDS
T04938
Symbol
fadJ_1
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai00071
Fatty acid degradation
gai00280
Valine, leucine and isoleucine degradation
gai00310
Lysine degradation
gai00362
Benzoate degradation
gai00380
Tryptophan metabolism
gai00410
beta-Alanine metabolism
gai00640
Propanoate metabolism
gai00650
Butanoate metabolism
gai00907
Pinene, camphor and geraniol degradation
gai00930
Caprolactam degradation
gai01100
Metabolic pathways
gai01110
Biosynthesis of secondary metabolites
gai01120
Microbial metabolism in diverse environments
gai01200
Carbon metabolism
gai01212
Fatty acid metabolism
Module
gai_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
IMCC3135_16840 (fadJ_1)
00650 Butanoate metabolism
IMCC3135_16840 (fadJ_1)
09103 Lipid metabolism
00071 Fatty acid degradation
IMCC3135_16840 (fadJ_1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IMCC3135_16840 (fadJ_1)
00310 Lysine degradation
IMCC3135_16840 (fadJ_1)
00380 Tryptophan metabolism
IMCC3135_16840 (fadJ_1)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
IMCC3135_16840 (fadJ_1)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IMCC3135_16840 (fadJ_1)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
IMCC3135_16840 (fadJ_1)
00930 Caprolactam degradation
IMCC3135_16840 (fadJ_1)
Enzymes [BR:
gai01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
IMCC3135_16840 (fadJ_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
IMCC3135_16840 (fadJ_1)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
IMCC3135_16840 (fadJ_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
DAO
F420_oxidored
NAD_binding_2
AlaDh_PNT_C
2-Hacid_dh_C
DUF1731
RS_preATP-grasp-like
Pyr_redox_2
FAD_binding_3
ApbA
NAD_binding_8
ThiF
DFP
Motif
Other DBs
NCBI-ProteinID:
ASJ73450
UniProt:
A0A2Z2NX52
LinkDB
All DBs
Position
3852173..3854293
Genome browser
AA seq
706 aa
AA seq
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MLEYNVDTNGIATLSWNMTDRAVNVMSPDARIALISRIDEVIADEDVRGVIITSVRNEFI
AGADLTFLTSMRGGDPAEVMKTMSPMRDALRRLEKSGKPSVAAINGTALGAGLEICLACT
HRIAADRPEAQLGLPEATLGLLPGAGGTQRLSRLIGVEKALDLILSGKRVSPAEAHKLGF
VNDLVERDELLTAARTWILAQDGPCLQPWDQRGFVLPGHAADSMALHRYFVAKGAEVEKA
TKNLSPAPQAILSSVFEGVRVPFDAGLAIEFTRFIGLLIGEVAQNTIRTMFFGVNEVRKL
STRPDGFDRFKPAKIGVLGAGLMGSGIAEIASLAGIEVVLLDRDEASSTAGRNRVKATFD
KQVARGWMSEKVAVDALSMITATPDFAKLAGAEAVIEAVFEDKAVKADITRKTLEVTGAD
ILFASNTSKILISSLAESSPRPDRFIGMHFFSPVGRMPLLELIRGKETSEETLAQAMDIG
KLFKKMPIVVNDGPGFFTSRCVSSYMNEGLIMLSTGVPAALIENCGRLSGMPVGPLTLAD
EIGMDLMLQVRRQEQQDYGKAPGGEFETLKEMAEGKKRTGRKGGGGFYDYPTGDAKTLWA
GVAEAFGGATKADPEDITKRLLHVQALEAARCFDEGIIDSPRDADVGSVFGWSFAKHTGG
VISYIDSYGLEAFVADCDRWKQEHGERFAVPILLREMAETNKSFHA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgctggaatacaatgtagacactaacggaattgcgacgctcagttggaatatgactgat
cgagcggtaaacgtgatgtccccggatgcgcgtatcgcattgatctcacggatcgacgaa
gtcattgccgatgaagatgtgcgcggtgtcatcatcacgtctgtgcgcaacgaatttatc
gcgggcgcagacctgacatttttgacatcgatgcggggtggggatcctgccgaagtcatg
aaaactatgagtccaatgcgtgatgcgctgcggcggttggagaaatctggcaagccaagc
gttgcagcgatcaatggaactgcattaggggcaggcctagaaatttgcctcgcgtgtaca
caccggattgctgcagaccgtccagaggcccagctaggactccccgaggctacattggga
cttttgccaggcgctggtgggacgcagcgactttcccgcctgattggcgttgagaaggcg
ctggatttgatattgagtggcaagcgcgtttcaccagccgaggcccacaaacttggcttt
gtgaatgaccttgttgaacgcgatgaacttttaacagctgccagaacttggattttggca
caagatggcccgtgcctgcagccttgggaccaaagaggattcgttctgccgggacatgcg
gcggatagtatggcgctgcaccgttactttgtcgccaagggtgccgaagtcgaaaaggcg
accaagaaccttagccccgctccgcaagcgatattgtcttcagtctttgaaggcgttcgc
gtcccgtttgatgctggtctggccatcgagtttacgcggtttatcggtttgctgattggc
gaggtcgcacaaaataccatccgcacaatgttctttggcgtcaatgaggtgcgcaagctt
tcgacacgtccagatggttttgatcgcttcaaacccgcgaaaattggtgtgcttggagct
ggcctaatgggatcaggtatcgctgaaattgccagcttggctgggatcgaggtggtcttg
cttgatcgcgatgaggcgtcttcaaccgccgggcgtaaccgcgtgaaagcgacattcgac
aagcaggttgcgcgcggctggatgtcagaaaaggtcgctgttgatgcattaagcatgatc
acggcaacaccagatttcgcgaaattggctggtgcggaagctgttatcgaagccgtgttt
gaggacaaggcggtcaaggccgatatcacgcgcaaaacgttggaagtgacaggggcggat
attttgttcgcgtctaatacgtccaaaattctgatctcgtcactggccgaaagctctcca
cgacctgaccgctttatcggcatgcactttttctccccggtgggtcgaatgccgttactt
gaacttattcgcggcaaagagacttcggaagaaacgcttgctcaggcaatggatatcggc
aaactgttcaaaaaaatgccaattgtcgtgaacgacggcccgggtttctttacgagccgt
tgcgtcagcagttatatgaacgaaggtttgatcatgctgtccacaggggttccagcagcg
ttgatcgaaaattgtggccgcttgtctggcatgccagttggtccgctgacattggcggat
gagattggtatggatttgatgttgcaggtcagacgccaagaacagcaggattatggaaaa
gcccctggtggagaatttgaaaccctgaaagaaatggccgaaggcaaaaaacgcacaggc
cgcaaaggcggcggcgggttttatgactacccaacaggagatgccaagaccctttgggcg
ggtgttgcggaagcctttggcggagcgacgaaggccgaccccgaagatattacaaaacgc
ttactacatgtccaagcactggaagctgcgcgctgctttgatgaaggtattattgacagc
ccgcgagatgcggacgtcgggtccgtgttcggttggagctttgccaagcatacgggcggc
gtcatttcctatatagattcctatggtttagaggcgtttgtcgccgattgcgatcgttgg
aaacaggaacacggtgaacgcttcgcagttccaatcctcctacgtgagatggccgaaacg
aacaaaagtttccacgcctga
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