Granulosicoccus antarcticus: IMCC3135_20325
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Entry
IMCC3135_20325 CDS
T04938
Symbol
rafR_4
Name
(GenBank) HTH-type transcriptional regulator RafR
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
gai
Granulosicoccus antarcticus
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gai03000
]
IMCC3135_20325 (rafR_4)
Transcription factors [BR:
gai03000
]
Prokaryotic type
Helix-turn-helix
LacI family
IMCC3135_20325 (rafR_4)
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ASJ74143
UniProt:
A0A2Z2NRZ2
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All DBs
Position
complement(4618143..4619216)
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AA seq
357 aa
AA seq
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MAAVQDSKGTLKGIATELNLSVTTVSRALGGFSDVAPATRQRVLDAAARAGYSPNSAARS
LVTGRTNFVCLIFPLRDRARIDPFLGEYITGLSEGLVECGRDLFLSTVASNQTDLGVLRH
VVESGRADGIVLNRIAEHDERVDYLIKRGFPFVTHGRTLENSAEHSWIDTDGKKAFSDMF
KWLYSLGHRRFGLLSITEAMSFRSHREEGLQEAIAEQNDPDVSVVIQRVPQFDIDAREFS
VNQLLNDRHRPTVILALTDEMGLCVLERAAQMGISVPDELSVIGYDNIPESAYAKPGLTT
FDQSTQDTARQMAALLANILDGQTGITQTMIEPILIKRGSHGPAPAPAPVVSSITNH
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggtacaggacagtaaaggcacattgaagggtatcgcgacagagctgaatctg
tccgtgacgaccgtgtctcgtgctctgggtggtttttcggatgtggcgccagccacacgc
caacgcgtgcttgatgcggctgcgcgtgccggatattcgcctaattcggcagccagatcg
ctggtcaccggccgcaccaattttgtctgtctgatcttcccgttgcgtgaccgggctcgt
attgatccgtttttgggcgagtacattaccggactgagtgaaggcctggttgagtgtggg
cgcgacctgtttctgtccacggtcgcctccaaccagaccgatctgggtgtcttgcggcac
gtggtggagtcgggcagggcagatggcattgttctgaaccgtatcgccgagcacgatgag
cgcgttgactacctgatcaaacgaggctttcctttcgtgactcatggcagaacgctggag
aacagtgcggagcacagctggatcgataccgatggaaagaaggcattttcggatatgttc
aaatggttgtattcactgggccatcgccgttttggtcttctatccatcactgaagccatg
agctttcgcagtcatcgtgaggagggattgcaagaggcgattgccgagcagaatgatccg
gacgtcagtgtcgttattcagcgtgttcctcagttcgacatcgatgcgcgtgaattctcg
gtcaaccagttactcaatgaccggcatcgccccacggtcattctggcgctcactgacgag
atgggtctgtgtgttctggagcgtgccgcgcaaatgggaatcagtgttcccgacgagctg
agcgttatcggctatgacaatattcccgagtctgcttatgccaagcccgggctcaccacg
tttgaccagtcgactcaggatacagcccgccagatggccgcactgctggcaaacatcctg
gatggccagacaggcatcacccaaaccatgatcgaaccaatactgatcaagcgcggtagt
catgggcctgcgcccgcacctgcacctgttgtttcttcaatcaccaaccactag
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