Granulosicoccus antarcticus: IMCC3135_20955
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Entry
IMCC3135_20955 CDS
T04938
Symbol
lsrB
Name
(GenBank) Autoinducer 2-binding protein LsrB
KO
K10559
rhamnose transport system substrate-binding protein
Organism
gai
Granulosicoccus antarcticus
Pathway
gai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IMCC3135_20955 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gai02000
]
IMCC3135_20955 (lsrB)
Transporters [BR:
gai02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
IMCC3135_20955 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ASJ74268
UniProt:
A0A2Z2NWY8
LinkDB
All DBs
Position
complement(4748639..4749634)
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AA seq
331 aa
AA seq
DB search
MKTPFSKILAAGAISLGICASPAQADDMRIALVVKALGIGFFEAAAKGAEEAAAEMGGVE
IIYTGPTDTTAEGQIEVINSLIAQKVDAIAISANDQDAVVPALKKAMARGITVVSWDSGV
APEGRMMHLNPSSSPLIGNMIIKLAADHLPEGGEVAILSATATSTNQNVWIDEMNKVMDN
YPGIDVVTTVYGDDLSDKSYREAQGLMSSYPNLKAIISPTSVGIVAAAQAVSDAGKAGEV
NVTGLGLPSEMAAHVESGASKSFAIWNPIDLGYAATMIAYNLVKGEAVAEAGSEIGMGRL
GNVTLDDDRAGAMADPFVYDASNVNDFKDIF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaccattttccaaaatactggctgcgggcgctataagcctgggaatatgcgcc
agtccggcccaggcagatgacatgcgcattgcattggtcgtcaaggcactgggtatcggt
ttcttcgaagcggctgccaagggtgccgaagaggcagcggctgagatgggcggggtcgag
atcatctataccggtccgacggatacgacagcagaaggtcagattgaagtgatcaactcc
ctgatcgcccagaaggtggatgcgatcgccatttcggccaatgatcaggatgccgtggta
cctgccttgaaaaaggccatggctcgcggcatcactgtcgtgtcctgggactcgggcgtc
gcaccagagggtcgcatgatgcacttgaacccttcttccagtcccttgatcggcaacatg
atcatcaagttggcagccgatcatctacccgaaggtggtgaggtggccattctttcggcc
acggccacctcgaccaaccagaacgtctggatagacgagatgaacaaggttatggataac
tatccaggcattgatgtggtgacaacggtttacggagatgacctgtcagacaagagctat
cgtgaggcacaaggtcttatgtcttcgtatccgaacctcaaagccattatttcaccgaca
tcggtaggcattgttgctgcagcacaggcagtttctgatgctggcaaggctggcgaggtc
aatgtcacgggcctgggcctgccttcggaaatggccgcacatgtcgaatccggtgccagc
aagtcctttgctatctggaatccgattgatctgggttatgcggcaaccatgatcgcctac
aacctggtcaagggtgaagcggtggccgaggcgggtagcgaaattggtatgggtcgcttg
ggtaacgtgacgctggatgatgatcgtgcaggcgccatggcggatccgttcgtgtatgac
gcctctaacgtcaatgatttcaaggatatcttctaa
DBGET
integrated database retrieval system
