Granulosicoccus antarcticus: IMCC3135_22050
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Entry
IMCC3135_22050 CDS
T04938
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai03030
DNA replication
gai03430
Mismatch repair
gai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC3135_22050 (dnaX)
03430 Mismatch repair
IMCC3135_22050 (dnaX)
03440 Homologous recombination
IMCC3135_22050 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gai03032
]
IMCC3135_22050 (dnaX)
03400 DNA repair and recombination proteins [BR:
gai03400
]
IMCC3135_22050 (dnaX)
Enzymes [BR:
gai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC3135_22050 (dnaX)
DNA replication proteins [BR:
gai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC3135_22050 (dnaX)
DNA repair and recombination proteins [BR:
gai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC3135_22050 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_16
AAA_5
AAA_22
RuvB_N
AAA_14
DUF3646
AAA_30
AAA_18
AAA_assoc_2
PIF1
AAA_2
nSTAND3
TsaE
AAA_7
NTPase_1
AAA_24
DUF190
RsgA_GTPase
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ASJ74482
UniProt:
A0A2Z2NSJ8
LinkDB
All DBs
Position
complement(4998717..5000525)
Genome browser
AA seq
602 aa
AA seq
DB search
MSYKVLARKWRPQHFRDMLGQEPVLRALVNALDTNRLHHAYMFTGMRGVGKTTIARIFAK
CLNCETNGVSSNPCGECSACRDIEAGRFFDLIEVDAASRTKVEETRELLENVPYAPASGR
YKVYLIDEVHMFSNHSFNALLKTLEEPPEHVKFLLATTDPQKVPVTVLSRCLQFNLKRMA
PGNLADYLSKILDEESIEHERPALDLIARASEGSVRDSLSLVEQAAAFGEGAVRESDVET
MLGRASVDRLLGLVESLGRGDVAQLFERVEQLAEYAPDFSELMGEILSLLHRIALLQMVP
GSVSEDTAGFERLTQLATELADDEIQLYYQIGTHARRDMPFAPDPREAFDMALLRMNTFR
PQGEPGQPSAPGSVPALAPVAAPVAPASTAARGSVSAGAALRDAALAAARGETVPTKPTP
AAVEPAVRAPAAQTPPAQTARPPAAPMPAAQAPAAPTPTARAPASSASVDRSNIKIGDWR
SIVAELDISGMPKQLASNCELVSVAGDAFNLRLESTSEHLHTPRFSERVQTALSEWLGRP
AKLQISLVDDQLSTPSRIDEQVRADQMSAARDSIGQDPVVRQLIDRVDAAVDEASIAPLG
ED
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaaagttcttgcgcgcaaatggcggccgcaacactttcgcgacatgctaggc
caagagcctgtgttgcgtgcgcttgtgaatgcgctggataccaaccgcttgcaccatgct
tatatgttcacgggcatgcgcggcgttggcaagacaaccattgcacgtatcttcgccaag
tgtctcaactgcgagaccaatggcgtcagttcaaacccctgtggggaatgcagcgcttgt
cgggatatcgaggcggggcgtttttttgatctgatcgaggttgatgccgcctcccggacc
aaggtcgaggaaactcgcgaactactggagaacgtgccctacgcacctgccagtggacgc
tacaaggtgtacctgatcgatgaggtgcacatgttttccaaccacagtttcaacgccttg
ttgaaaactctggaagagccgccggagcatgtgaagttcctgctggccaccacagaccct
cagaaagtccctgtcaccgtgctctcgcgctgcctgcagttcaatctgaaacgcatggcg
ccgggtaatctggcagattatctgtcaaaaattctggatgaagaatccattgagcatgag
cgcccggcgcttgatcttattgcccgtgcctcggaaggcagcgtacgtgattcgctgagt
ctggtagagcaggcagcagcttttggcgagggtgctgttcgcgaatcggacgtcgagacc
atgttgggtcgtgcgtcggtggatcgattactgggtctggtcgaatcactggggcggggt
gatgttgcgcaattgttcgagcgtgtcgaacagttggctgaatatgctccggacttctcc
gaattgatgggagagattctgagtctgctgcatcgcatagcgttgctccagatggtgccc
ggtagcgtctctgaagataccgccggttttgaacgcctgacgcagcttgccactgagctg
gctgatgacgaaattcagttgtactaccagattggtacccatgcgcgtcgtgacatgccc
tttgctccggatccgcgtgaagcatttgatatggccctgctgcggatgaacaccttccgg
ccacagggtgagcctggccagcccagcgcacctggttctgtacccgcactcgcacctgta
gccgcgcctgtagcacctgcatcgacagcggcccgaggctcggtgtccgcaggcgcagca
ctgcgcgatgccgctctggcagcagcgcggggagagacggtgccaacaaaaccgactccc
gcagctgtggagcctgcagtacgagcccctgcggcacaaactccgccagcgcaaaccgca
cgacctcccgcagcgccgatgccagcagcgcaagctccggctgcacctacaccaacagca
cgcgctccagcgtcttcagccagcgtggatcggagtaatatcaaaataggggattggcgc
agtattgttgcggagctggatatttccggtatgcccaaacaattggccagtaactgcgag
cttgtgtccgtagcgggcgatgctttcaatctgcggcttgagtcgacgtccgagcatttg
catactccccggttttccgaacgagtgcagaccgcactgagcgaatggctcggcaggcct
gcgaaattacagatatcgctggttgatgatcagttgagcaccccgtctcgtattgatgag
caggtgcgggcggaccagatgagcgccgcacgggactcgattggccaggatccggttgtt
cgtcagctcattgatcgtgtcgacgctgcagtcgatgaggccagcatcgcacctctgggc
gaggactag
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