Granulosicoccus antarcticus: IMCC3135_23175
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Entry
IMCC3135_23175 CDS
T04938
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
gai
Granulosicoccus antarcticus
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gai03009
]
IMCC3135_23175 (dbpA)
Enzymes [BR:
gai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IMCC3135_23175 (dbpA)
Ribosome biogenesis [BR:
gai03009
]
Prokaryotic type
rRNA helicases
IMCC3135_23175 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
AAA_22
DUF6342
Motif
Other DBs
NCBI-ProteinID:
ASJ74704
UniProt:
A0A2Z2P4E5
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All DBs
Position
5268185..5269576
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AA seq
463 aa
AA seq
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MTQPTGELFSSLPIRAELLEAVASLEYAEMTPIQAATLPQILEGRDVLAQARTGSGKTAA
FAIGLLNKLDIQTFLTQSLVLCPTRELADQVASEIRRLASALPNTKVLTLCGGKPMQAQL
ASLKREAHVIVGTPGRILKHLEKGSLQVGGIKTLVLDEADRMLDMGFHDDIMRILDKTND
IKQSLLFSATYPDEIKHISAAVQKNPVEVRMENSESSEQIDQVFFRTTENGKKQALISVL
ENYHPASTLVFCNRKLHCQELTQALQGQGFSAKALHGDLDQYDRDESLIQFANNSISILV
ATDVAARGLDITDLSAVINYDLSHDTESHVHRIGRTGRAGSDGLAISLVLPNEDFRVQAI
AELQNRRIHIQELPTRAGKSDGKLVPPTVTLHINAGRKDKIRPGDIVGALTASSELNKDD
IGKITVLDKMAYVAVVRAQAHKALDLLANGKIKGRKFRVRTLR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
ttgacccagcctaccggagagcttttctcctcactgcctatccgcgcagaattgcttgag
gctgttgcatcactcgagtatgcagagatgacgcccattcaggcggcgactttgccccag
atcctcgagggacgggacgtgcttgcgcaggctcgcacaggcagtggcaaaacggcggct
tttgccatcggtctgttgaacaagctggatattcagacctttctgacacaatctctggtg
ctttgcccgacgcgtgagctggctgaccaggtcgccagtgaaatacgccgcctcgccagt
gctctgccgaacaccaaagtgctgacactgtgtggtggcaaacccatgcaggcccaactt
gcctcactcaagcgcgaggcacatgtcatcgtcggcacaccgggacgcattctcaagcac
cttgaaaagggctcgctgcaggttggcggcatcaagactctggtgctggacgaggctgat
cgcatgctcgatatgggcttccatgatgacatcatgcgcattctggacaagaccaacgac
atcaagcaatcactgctgttttccgccacctaccctgatgaaatcaaacatatcagtgct
gctgtgcagaaaaacccggtcgaagttcgcatggaaaactccgaatcaagcgaacagatc
gaccaggttttcttcagaaccactgaaaacggcaaaaagcaggctttgatcagcgtgctg
gaaaactatcatccggcatcgactctggttttctgcaatcgcaagctgcattgtcaggag
ctgacccaggcgctacagggacagggtttttctgccaaagccctgcacggtgaccttgat
cagtatgatcgcgacgaatcactgatccagttcgccaacaacagtatctcgattctggtg
gccaccgacgttgccgctcgcggcctggatatcacggatctgtccgcggtgatcaactac
gacttgtcgcacgataccgaatcacatgttcatcgtattggcagaaccggacgcgccggc
agtgatggcctggcaatcagcctggtattgcccaacgaggatttccgcgtacaggctatc
gcagagctccagaatcgacgcattcatattcaggagctgccaacccgtgctggaaaatct
gacggcaaactggtgccaccaacagtaaccttgcatatcaatgctggcagaaaggacaag
attcgtcccggagacattgttggcgccctgacggcgagctccgaactgaacaaggacgat
atcggcaagataaccgtactggacaagatggcctatgtggctgttgtacgagcgcaagca
cacaaggcgctggacctgcttgccaatggcaagatcaagggtcgtaaattcagggtcaga
acgttgcggtaa
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