Granulosicoccus antarcticus: IMCC3135_23805
Help
Entry
IMCC3135_23805 CDS
T04938
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai00541
Biosynthesis of various nucleotide sugars
gai01100
Metabolic pathways
gai01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IMCC3135_23805 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gai01005
]
IMCC3135_23805 (kdsA)
Enzymes [BR:
gai01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
IMCC3135_23805 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
gai01005
]
Lipid A
IMCC3135_23805 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
ASJ74830
UniProt:
A0A2Z2P0V5
LinkDB
All DBs
Position
complement(5425294..5426133)
Genome browser
AA seq
279 aa
AA seq
DB search
MQLCGFEVGLNKPMFLIAGPCAIESEDMAMSTAVTLKRMTAELGIPFIYKSSFDKANRSS
QLSFRGPGIEEGLRILAKVRDEVGVPVLTDVHEDTPIDEVADVVDVLQTPAFLCRQTNFI
ERVARAGKPVNIKKGQFLAPADMQHVVAKAHAVGNQQIMVCERGASFGYNNLVSDMRGLA
IMRSTGCPVVFDATHSVQLPGGQGSSSGGQREFVPVLARAAVAAGVSGLFMETHPNPAKA
LSDGPNAWPLDQLQSLLETLMRLDSTIKAGELAETPYLS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcagctctgtggtttcgaagttggcttgaataaaccgatgtttctgattgcaggtccg
tgtgcaatcgaatccgaggacatggccatgagcaccgccgtcacgctcaagcgtatgacg
gcggagctgggtattccgttcatctacaagtcctcgtttgataaggccaatcgttcctcg
cagctcagcttcaggggcccgggcatcgaggaaggcctgcgcattctggccaaggtccgg
gatgaggtcggtgtgccagtgctgaccgatgtgcatgaagacacccccattgacgaagtc
gccgatgtggtggacgtgctacaaacaccggcttttttgtgccggcagaccaattttatc
gaacgggttgcgcgcgccggcaagcctgtcaacatcaagaaaggtcagtttctggcccct
gcagacatgcagcacgtcgttgcgaaggctcatgcggtcggtaaccagcagatcatggtg
tgcgaacgtggagcctcctttggttacaacaacctggtatccgacatgcgtggcctggcc
atcatgcgtagtactggttgtccggtcgtttttgatgcgacccactcggtacagttgccg
ggtggacagggcagcagctcgggagggcaacgcgagttcgtccctgttctggcacgggca
gccgttgctgccggagtttccggtctgttcatggaaactcatccgaacccggccaaggcg
ctgagcgacggacccaacgcctggcctctggatcagttgcaatcactgcttgaaacattg
atgcgactggacagtacaatcaaggcaggcgaactggcggaaacgccgtatctgagctga
DBGET
integrated database retrieval system
