Granulosicoccus antarcticus: IMCC3135_24605
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Entry
IMCC3135_24605 CDS
T04938
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
gai
Granulosicoccus antarcticus
Pathway
gai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IMCC3135_24605 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gai03400
]
IMCC3135_24605 (uvrB)
DNA repair and recombination proteins [BR:
gai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IMCC3135_24605 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IMCC3135_24605 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_33
Viral_helicase1
UB2H
KdpC
Motif
Other DBs
NCBI-ProteinID:
ASJ74988
UniProt:
A0A2Z2NYZ1
LinkDB
All DBs
Position
complement(5605235..5607259)
Genome browser
AA seq
674 aa
AA seq
DB search
MSIKFDLHTSYKPAGHQPEAIEKLVAGIDDGLAYQTLLGVTGSGKTFTIANILQQKQRPA
IVLAPNKTLAAQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPASDTFIEKDSSINEHIE
QMRLSATKALFERRDTVIVATVSSIYGLGDPQQYHKMVLHLKRGEIVNQRDVLRRLAELQ
YTRNDTELKRGTYRVRGEIIDVYPADSERNAIRVELFDDEIEALSFFDPLTGEVVQKVPR
LTIYPKTHYVTPRERLLDATDLIKDELRERLEQLTAAGKLVEAQRLQQRTQFDLEMIYEL
GYCSGIENYSRYLSGRLPGEPPPCLFDYLPEDSLLFIDESHVTVPQLGAMYKGDRSRKEN
LVNFGFRMPSALDNRPLKFEEWELLSPQTIFVSATPGNYERDHADQTVELVVRPTGLIDP
DVEIRPARTQVEDVLSEIHDRVSRHERVLITTLTKRMSEDLTDFLGEHDVKVRYLHSDVD
TVERSEIIRDLRLGVFDVIVGINLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNLHGKAILYADNLTGSMQRAIDETNRRREVQIRYNLDHGITPVGITKSINDVMEAGG
SSQGDKRRGRSATGKSAKTASVAKIENLSAAQAAKRIKELEKEMYECARNLEFERAAALR
DELEQVREVVFKEG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaaatttgacctgcacacaagctacaagccggcaggacaccagccagaagcc
attgaaaagctggttgctggtattgatgacggtctggcttatcagacgttgctgggtgtc
acaggctcgggcaagacgttcacgattgccaatattctccagcaaaagcagcgccctgcg
atcgtgctggcaccgaacaagacgctggccgctcagttgtatggtgagttcaaggagttc
ttccccaacaacgcggttgagtattttgtctcctattacgattactaccagccagaagcc
tatgtgccggccagcgatacgttcattgaaaaggattcatccatcaatgagcatatcgaa
cagatgcgactgtcggcaacgaaggcgctgttcgagcgccgggacaccgttatcgtggcc
actgtgtcgtccatatacggcctcggagatccgcagcaataccacaagatggtgctgcac
cttaaaaggggggagatcgtcaatcagcgcgatgtactcagacgcctcgccgagttgcag
tacacccgcaatgatacggagctcaaacgcggtacctaccgggtacgtggagagatcatc
gatgtatacccggcagattcggaaaggaatgcaatccgtgtagagctttttgacgacgag
atcgaggctctgagttttttcgaccctctgaccggggaggttgtgcagaaggtgccgcgg
ctgacgatatatccgaagacccattacgtcacgccaagagagcgcctgctggatgcaacg
gacctgatcaaggatgaattgcgcgaacggctggagcaactgactgctgccggcaagctt
gtggaggcccagcggcttcagcagcgcacgcagttcgatctggagatgatctacgagctg
ggctactgctctggtatcgagaactattcacgttacctgtctggccggcttcctggtgag
ccaccgccgtgtctgttcgactatctaccggaggacagtctgctgttcatcgatgaaagt
catgtcacggtgccgcagttgggtgcgatgtacaaaggtgatcgttcacgcaaggaaaat
ctggtcaatttcggattccgaatgccctcggcactggataaccggccgctcaaattcgag
gagtgggagttgttgtcaccgcagacaatctttgtatcggcaactcctggcaactatgag
cgcgatcatgcagaccagacagtggaactggtcgtcaggccaacgggtctgattgaccct
gatgtggaaattcgtccggcccggactcaggttgaagatgtgctgtcggagattcatgac
agagtctctcgccatgagcgggtgctgatcaccacgctaaccaagcgcatgtcagaggat
ctgaccgactttcttggtgagcatgatgtcaaggtgcgttatctgcattccgacgtggat
accgtcgagcgcagcgaaatcattcgcgatttgcgattgggtgttttcgatgtcatcgtc
ggaatcaacctgttgcgcgagggactcgatctgccggaagtctcactggtggcaatactg
gacgccgacaaggagggctttctgcgctccgaacgatcgttgatacaaaccattggcaga
gccgcgcgtaacttgcacggcaaagcgattctgtacgcagataatctgacagggtcgatg
cagcgcgctatcgatgaaaccaatcgtcgtcgcgaggttcagattcgatacaacctggat
catggcatcacgccggtgggtattaccaagtccatcaacgatgtgatggaggcgggtggt
tcctcgcagggagacaagcggcgtggaagatcagcaacaggaaaaagtgcgaagacggcc
agtgtggcaaagatcgagaatttgtcggcggcacaggcagctaaacgcataaaggagctg
gaaaaggaaatgtacgaatgtgcgcgtaatctggaattcgagcgtgccgcagctcttaga
gatgaacttgagcaggtcagggaagtggttttcaaggaaggctga
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