Granulosicoccus antarcticus: IMCC3135_24945
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Entry
IMCC3135_24945 CDS
T04938
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai03030
DNA replication
gai03430
Mismatch repair
gai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC3135_24945 (holC)
03430 Mismatch repair
IMCC3135_24945 (holC)
03440 Homologous recombination
IMCC3135_24945 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gai03032
]
IMCC3135_24945 (holC)
03400 DNA repair and recombination proteins [BR:
gai03400
]
IMCC3135_24945 (holC)
Enzymes [BR:
gai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC3135_24945 (holC)
DNA replication proteins [BR:
gai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC3135_24945 (holC)
DNA repair and recombination proteins [BR:
gai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC3135_24945 (holC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
ASJ75053
UniProt:
A0A2Z2NUX4
LinkDB
All DBs
Position
5678645..5679079
Genome browser
AA seq
144 aa
AA seq
DB search
MTRIDFYVLANNDPLARLQLVCKLAEKAIGQNQKVLIHSDSDEQLITLDQTLWDFRALSF
IAHQLLPANHVFSTSDNDPVHLSTGAPAPDRTLLINLAEQVPPFFSRFERTLEVINEEPD
VQSAGRLRYRFYQQRGYPLHHHKI
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggatcgacttctacgtgctggcaaataacgatccgcttgctcgcctgcaactt
gtctgcaagctggctgaaaaggcgatcggccagaaccagaaggtcctcatccatagcgat
tcggatgagcagctgataacgcttgatcaaacactgtgggatttccgggcattgagtttc
atcgcccatcaattattacccgcaaatcatgttttcagcacatcggacaacgatccagtc
cacttgtcgacgggtgcaccagcacccgatcgaaccttactgatcaatctggcagaacag
gttccccccttcttctcgcgtttcgaaagaaccctggaagtcatcaatgaagagcctgac
gtgcagagcgcgggccgcttgcgctaccgcttctatcagcagcgcggctatccgctacat
catcacaaaatctag
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