Granulosicoccus antarcticus: IMCC3135_27515
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Entry
IMCC3135_27515 CDS
T04938
Symbol
oprF_7
Name
(GenBank) Outer membrane porin F
KO
K03286
OmpA-OmpF porin, OOP family
Organism
gai
Granulosicoccus antarcticus
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gai02000
]
IMCC3135_27515 (oprF_7)
Transporters [BR:
gai02000
]
Other transporters
Pores ion channels [TC:
1
]
IMCC3135_27515 (oprF_7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OmpA_membrane
DUF748
Pilus_CpaD
TSP_3
Motif
Other DBs
NCBI-ProteinID:
ASJ75557
UniProt:
A0A2Z2P4F5
LinkDB
All DBs
Position
complement(6297693..6299507)
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AA seq
604 aa
AA seq
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MNFPRNSRRLNAAPGRYRSILAVLIGSVLTGCVMPSGQPSLQLPSGSSDFRSRLYAGASL
GGSHLSSSEALEVESSNAMTTQLRLGYDLHDRVAVELDTSILGESQLRESQSAVDHTSAS
VSALIYGLSGSQMRSRREGLSAYARLGYGSLKRSSDIVELENSESGPVLGLGAEYGLSNG
LGLRADITRFDADVSYIGLGAVYRFGVQASSRGQMVAGAAEPSLGAANTAGPEIEAMALS
MADRWRPAMRRGDADADGVLDSRDDCPETIAHITVDNTGCGLFDAVLSDVRFRSGSSWLS
PSARAQLNEVAETLLAFPESRVQVRAHTDSQGKSDMNMNLSTGRAQVVSQYLQSRGVHER
QLQAVGMGETEPLGSNSTAVGRLQNRRVDVVTLPDQDAGQLSVQPMLAVRRVIVVSDPRQ
RDSQRDGLVDTQDVVSASPTREKSSLKTAEAKAVVSEEPDLQSAMSVDTTARSRIPIMPL
PEPGFAPGVSISGVVDGLDFPDGSSELSANARNSLGSVIATMRNNPRIRIAVMAHTDNSG
DAQINLRLSKQRAQAVASFLAGEGVVPDRLEAEGYGELLPLVQNMTPADRATNRRVEIRI
LRNP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcctcgaaattcgcgcagattgaatgcagcacccggcaggtatcgttcgatt
cttgctgtgctgattggtagtgtcctgacgggctgtgtaatgccgtcaggtcagccctct
ttgcaactgccatctggctccagcgactttcgcagtcgtctgtacgcaggggcctccctg
ggtggctctcatctgtcgtcgagtgaggctctcgaggtagagagctccaatgccatgacg
acccagctgaggctcggctacgatctgcatgacagagtagccgtggagctggatacctcg
attctgggggagtcgcaattgcgtgaatcacagagcgcggttgatcacacctcggcatcc
gtcagtgcgctgatctatggtctcagcggatcgcaaatgcgttcacggcgagaagggttg
agtgcctacgcccggctggggtatggctcgttgaaacggtcttcggatattgttgaactg
gaaaacagtgagtcaggccctgtgctggggctaggtgccgaatacggactttccaacggt
ctgggtttgcgggctgatatcacccgtttcgatgccgatgtgtcctatatcgggctgggc
gcggtctaccgtttcggtgttcaggcatcaagtcgtgggcagatggtagctggtgctgcc
gagccctctctgggggcggctaatacagccggccccgagatcgaggcaatggcgttgtca
atggccgatcgttggcgtcccgctatgcgtcgcggcgatgcagatgccgatggtgtgctc
gattcgcgagacgattgccccgaaacgatcgcgcatataactgttgataatacgggctgt
ggtttgtttgatgccgtgctgagcgatgtgcgctttcgcagtggatccagctggctgtcg
ccatctgcacgcgctcagctcaatgaggttgcagaaaccctgctggcttttccagagtcg
cgagtacaagtgcgagcccatacagattctcaaggcaagagcgacatgaacatgaatttg
tctaccggacgtgctcaggtcgtctcgcagtatctgcagagtcgcggtgtgcatgaacga
cagttgcaggctgttggtatgggtgagacagaaccgttgggtagcaacagtacagcggtg
ggccgtctgcaaaatcgccgagtggatgttgtcacattgcccgatcaggatgcgggtcag
ctgtccgttcagcccatgcttgcagtgaggcgagtcattgttgtcagtgacccgcgacag
cgcgattcgcagcgcgatggtctggttgatactcaggatgtcgtgagtgcttcgccaaca
cgtgaaaagagctcgctcaagacggcagaagccaaagctgttgtcagcgaggagccagac
ttgcagtcggctatgtctgttgatacgacggcacgatcaagaatacctatcatgccgttg
ccagagccaggctttgcgccgggggtcagtatatcgggagttgttgacggacttgacttt
ccagatggctccagtgaattgtcagctaacgcccggaattctctgggtagcgtcattgct
acaatgcgtaacaatccccggattcgcattgctgtcatggcacacactgataatagtggt
gatgctcagattaatttaaggctgtcaaaacagcgtgctcaagcggttgcgtccttcctt
gcgggcgagggtgtcgtgccagatcggcttgaggccgagggttatggtgagttattgccc
ttggtgcaaaatatgacaccggcggatcgtgcaaccaaccgacgtgttgagattcgcata
ttgcgaaacccgtag
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