Granulosicoccus antarcticus: IMCC3135_28250
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Entry
IMCC3135_28250 CDS
T04938
Symbol
ydcV_6
Name
(GenBank) Inner membrane ABC transporter permease protein YdcV
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
gai
Granulosicoccus antarcticus
Pathway
gai02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IMCC3135_28250 (ydcV_6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gai02000
]
IMCC3135_28250 (ydcV_6)
Transporters [BR:
gai02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
IMCC3135_28250 (ydcV_6)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
BIV_Env
Tenui_NS4
Motif
Other DBs
NCBI-ProteinID:
ASJ75702
UniProt:
A0A2Z2NW80
LinkDB
All DBs
Position
complement(6475778..6476620)
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AA seq
280 aa
AA seq
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MSDRRPLSFYLLALFFAVFVLFLYGPTITIAILSFQGPSGGLTFPMNGVSLHWFYDLFEQ
QAVGDIWGSFRRSLALGLIVMTITIVVSLMGGMAFRRRFLGSGVVFYLIITSLIIPSILI
SLGVGILFNILDWDVHWSTSALGSQLTWTIPFGLLIMFAVFNRFDERYEEAARDLGASSW
QVVRHVILPLIAPSLIGVGLFGFTLSYDEFARTLLTAGSYNTLPLEIYGMTTSVTTPVLY
ALGTLTTLFSFFIIALFMGIFLWLKRRSRGVIDIVVQEAE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagacgaccattaagtttttatctactagcgctattttttgccgtgtttgtc
ctgttcctctacgggccgaccattaccatcgccattctgtcgtttcaaggaccctccggt
ggtttgacctttcccatgaacggcgtgtcgttacattggttttatgatctgtttgaacaa
caggcggttggtgatatctggggttcgttcagacggtcgctggctttgggtttgattgtc
atgacgatcaccattgtcgtatcactgatgggaggcatggcatttcgtcgtcgcttcctt
ggctcaggcgtggtgttttatctgatcattaccagtcttattattccatctatcctgatt
tcactcggagtcggcatcttgttcaatattctggattgggatgttcattggtcgacctca
gctctgggttcacaactgacctggacgattccctttggactgctcatcatgtttgccgta
ttcaaccgctttgatgaacgctacgaagaggctgctcgcgacttgggtgccagcagctgg
caggtggtccggcatgtcattctgccgctgatcgcaccgagcctgatcggcgtaggcctg
ttcggttttaccttgtcctatgatgaattcgcacgcaccttgctcaccgcaggctcctac
aatacgctgccgttggagatctacggcatgacaacgagtgtcacgactccggttttgtat
gccttgggcacgctgacaacgttgttttcctttttcatcattgccttgttcatgggcatt
tttctatggcttaaaaggcgtagtcgtggcgtgatagacattgtcgttcaggaagccgaa
tga
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