Granulosicoccus antarcticus: IMCC3135_30365
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Entry
IMCC3135_30365 CDS
T04938
Symbol
phrB
Name
(GenBank) (6-4) photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
gai
Granulosicoccus antarcticus
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gai03400
]
IMCC3135_30365 (phrB)
Enzymes [BR:
gai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
IMCC3135_30365 (phrB)
DNA repair and recombination proteins [BR:
gai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
IMCC3135_30365 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ASJ76122
UniProt:
A0A2Z2NXE5
LinkDB
All DBs
Position
6922766..6924253
Genome browser
AA seq
495 aa
AA seq
DB search
MQTAALIFPHQLFDQHPAIRDDLEKVYLVEESLFFGDDRYPLTFHRQKLAYHLATLDAYE
KRLKQQHPVERIAYTGKSSLLDTLMVRLAENGCDCLRVVDVHDFELNKRLHRSCAKSQIE
LVILPTPAFLNTPEENQDFRSGRKRWFMADFYQWQRRRFDVLMEDGKPAGGQWSFDEDNR
KKMPTAEIKLIQPLPVKQRTARIRRACDQADKLIPDARGHLHDWLYPTTHEEAADWLDRF
CAERFAKFGPFEDAMVHGQSFLHHSVLTPMLNTGLLTPQQVLDTALAAQKEYKIPLNSVE
GFIRQLIGWREFMRATYDDLGVRMRTTNHWQHHNPLPDGFYTAETGIAPIDDCIGRVLET
GYCHHIERLMLLGGFLFLCEVDPDEIYRWFMEMFIDAYDWVMVPNVYAMSQNADGGLITT
KPYFSGSNYVLKMSNYQRGDWCDIWDGLYWRWIWKQRKALSGNPRWAMMCRAAEKMDAEK
RQNHLNCAEAYLESM
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgcagccctcatctttccccaccagttgtttgatcaacacccggccatacgt
gacgacctcgaaaaggtctatctggttgaagaatcactgttcttcggtgatgatcgttac
ccactcaccttccaccgccagaaacttgcctatcacctggcgacactcgatgcctatgaa
aagcggctgaagcaacaacacccggtcgaacgaattgcctataccggcaagtcctcactg
ctagacacgctgatggtgcgtcttgcagaaaacggatgtgattgcctgcgagtagtcgat
gttcacgatttcgaactgaacaagcgcttgcaccgatcctgtgcaaaatcacagatcgag
ctggtgattctgccgactcccgcctttctcaacacacccgaagagaaccaggattttcgt
agcgggcgcaaacgatggttcatggcagacttttaccagtggcaaagacgcagattcgat
gtactgatggaagatggcaagcctgccggtgggcaatggagcttcgatgaagacaatcgc
aagaaaatgcccaccgcagaaataaaattgattcaaccgctaccagtcaaacagagaaca
gcccgaatcagacgcgcctgcgaccaggccgacaaactcattcccgatgcccgtggtcat
ctgcatgactggctgtatcccacgacgcacgaagaggccgccgattggcttgatcgattc
tgtgcagagcgctttgccaaatttggcccctttgaagatgccatggttcatggacagagt
tttttgcatcattcggttctcactcccatgctcaacaccggactgctgacaccacagcaa
gttctggatacggcgctggcggcacagaaggaatacaagatcccgctgaacagcgtggag
ggttttatcaggcaattgatcggctggcgcgaattcatgcgcgccacctacgatgatctg
ggtgttcgcatgcgcaccacaaatcactggcaacatcacaatcctctacccgatggtttc
tacacggcagaaacgggtatcgcaccgattgacgactgtatcgggcgagttctggagacc
ggttattgtcatcacattgaacgactcatgctactcggcggttttctttttctgtgtgag
gtggatccggatgaaatctaccgttggttcatggaaatgttcattgatgcctatgactgg
gtcatggtacccaacgtctatgccatgagccagaatgctgatggtggcttgatcaccacc
aagccctatttttccggctcaaactacgtgttgaagatgagtaattatcagcgtggtgac
tggtgcgatatctgggatggcctctactggcggtggatctggaaacagcgcaaggcattg
agtggcaatccacgctgggcgatgatgtgccgtgccgcagaaaagatggacgctgagaaa
cgacagaatcacctgaattgcgcagaagcgtatctcgaatcgatgtaa
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