Gottfriedia acidiceleris: MY490_00025
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Entry
MY490_00025 CDS
T08082
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gaj
Gottfriedia acidiceleris
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaj03032
]
MY490_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
gaj03400
]
MY490_00025 (gyrB)
Enzymes [BR:
gaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MY490_00025 (gyrB)
DNA replication proteins [BR:
gaj03032
]
Prokaryotic type
DNA Topoisomerases
MY490_00025 (gyrB)
DNA repair and recombination proteins [BR:
gaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MY490_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
FTP
Motif
Other DBs
NCBI-ProteinID:
UPM56581
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Position
3993..5912
Genome browser
AA seq
639 aa
AA seq
DB search
MDQKMQEHNYDENQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYC
DEINVTIEEDNSITVKDNGRGIPVGIHEKMGRPALEVIMTVLHAGGKFGGGGYKVSGGLH
GVGASVVNALSTLLEVHVHREGTIYYQQFSKGIPVADMSIVGETDVTGTITHFKPDSEIF
TETIVYDFDTLANRLRELAFLNRGIRLTIEDRRENKQTKEFYYEGGIKSYVEHLNRSKEV
IHDEPIFVIGEKDGISVEIALQYNESYTSNIYSFTNNINTHEGGTHEVGFKTALTRVIND
YGRKNGLIKDQDSNLSGEDVREGLTAIVSVKHPDPQFEGQTKTKLGNSEVRTITEQIFGE
NLEKFLLENPTEAKKIVEKGLMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDS
SISEIYIVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEVRSMITAFG
TGIGDDFDIEKARYHKIILMTDADVDGAHIRTLLLTFLYRYMRQIIESGYIYIAQPPLYK
IQQGKKIQYAYNDRQMDEIMSTLNAVPKPVIQRYKGLGEMNPEQLWETTMNPETRTLLQV
NLQDAIEADETFETLMGEKVEPRRNFIQDNAKYVKNLDI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaagatgcaagaacataattatgatgaaaatcagatacaagttcttgaaggt
ttagaagctgtacgtaaaagaccgggtatgtatatcggttcaacgagcggaaaaggatta
catcacttagtatgggaaatcgttgataacagtatagatgaggcattggctggatactgt
gatgagattaatgtaacgattgaagaagataatagtattacagttaaagataatggccgt
gggattccagtaggtatccatgagaaaatgggtagacctgctctagaagtaattatgacg
gtacttcatgcgggtggaaaatttggcggtggtggatacaaagtatctggtggattacac
ggggtaggagcttcagtagtaaatgcgttgtctactttgctagaagttcacgtacatcgt
gaaggtactatttattatcaacaattttctaaaggtataccggttgcagatatgagtatc
gttggtgaaactgatgttacgggtactattacacattttaaacctgattcagaaattttc
actgaaaccatagtttatgactttgatactttagcaaaccgtttaagagaattagcgttc
cttaatagaggtattcgcttaacgattgaagaccgtagagaaaataaacaaacgaaagaa
ttctattacgaaggtggaataaaatcttacgttgaacatttaaatcgttctaaagaagta
atacatgacgaaccaatttttgttattggtgaaaaagatggaattagtgtagaaattgca
cttcaatataacgaaagctatacaagtaatatatattcattcacgaataatattaatact
cacgaaggtggtacgcacgaggttggatttaaaacagctttaactcgtgttattaatgat
tatggtcgtaagaatggtttaattaaggatcaagatagcaacttatctggtgaggatgta
cgtgaaggattaacggcgatcgtttctgttaaacatccagatccacagtttgagggtcaa
acaaaaactaagttaggtaatagtgaagttcgtacgattacagagcaaatttttggcgaa
aaccttgaaaagtttttattagagaatcctacagaagctaaaaaaatagttgaaaaaggt
ttaatggcggctagggctcgtgttgctgctaaaaaggctcgtgagttaacgagaagaaaa
agcgctttagaagtatcaagtttacctgggaaattagctgattgttcttcaaaagattct
tctattagcgaaatttatatcgttgagggtgattcagcgggcggaagtgctaaacaagga
cgagaccgtcacttccaagcaattcttcctttacgtggaaaaattattaatgtagaaaaa
gctcgacttgataaaattttatctaataacgaggttcgttcaatgataactgcttttggt
accggaatcggtgatgatttcgatatcgagaaagcacgataccataaaattatattgatg
acggatgctgatgtagatggtgcccacatccgtactttattgttaacgttcttatatcgt
tatatgcgtcaaatcattgaaagtggttatatttatattgctcaaccacctttatataaa
atccaacaagggaaaaaaatacaatatgcttataatgatcgacaaatggatgagattatg
tcgactttaaatgcagtaccaaaacctgttatccaacgatataaaggtctaggtgaaatg
aaccctgaacagttatgggaaactacaatgaatccagaaactagaacgttactacaagtt
aaccttcaagatgcgatcgaagcggatgaaacgtttgaaacattaatgggtgaaaaagta
gagccaagacgtaactttattcaagataacgctaaatatgtaaagaatttagatatttaa
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