Gottfriedia acidiceleris: MY490_00840
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Entry
MY490_00840 CDS
T08082
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MY490_00840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaj03021
]
MY490_00840
03400 DNA repair and recombination proteins [BR:
gaj03400
]
MY490_00840
Enzymes [BR:
gaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MY490_00840
Transcription machinery [BR:
gaj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MY490_00840
DNA repair and recombination proteins [BR:
gaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MY490_00840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UPM54495
LinkDB
All DBs
Position
151608..152552
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDSKYGKFVIEPLERGYGTTLGNSLRRILLSSLPGAAVTAIQIDG
VLHEFSTVEGVVEDVTTIILNVKKLALKIYSDEEKTLEIDVRGEGPITAADITHDSDVEV
LNPDLHIATLAKDAHLRMRLTARRGRGYIPADGNKREDQAIGVIPIDSIYTPVSRVTYQV
ENTRVGQVSNFDKLTLDVWTDGSIGPKDAIALGSKILTEHLNIFVGLTDEAKNAEIMVEK
EEDQKDKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
HKLEELGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatcgaaaagccgaaaatcgaaacggttgagatcagtgacgattccaaatat
ggtaaattcgttattgaaccacttgagcgtggatatggtacaacgctaggtaactcctta
cgtcgtatccttttatcctcacttcctggtgccgctgtaactgctattcaaattgatggc
gtgttacatgagttctctacagttgaaggtgttgtagaagacgttacaacaattatcctt
aatgttaaaaaacttgctctgaaaatttattcagacgaagaaaaaacattagaaattgat
gtacgcggtgaggggccaattactgcagccgatattacgcatgatagcgatgttgaagtt
ctaaatccagatcttcatattgcaactcttgctaaagatgctcatttacgtatgcgtcta
actgctagacgtggacgtggatacatccctgcagatggtaacaaaagagaggatcaagca
ataggtgttattcctatcgactcgatttacactccagtgtctcgtgtcacataccaagtt
gaaaatacacgtgtgggacaggtttcaaatttcgataagttaacacttgatgtttggact
gacggaagtattggaccaaaggatgctatcgcactaggttcaaaaattcttactgaacac
ttaaacatttttgtaggtttaactgacgaagctaaaaatgcagaaatcatggtcgaaaaa
gaagaagatcaaaaagataaagtccttgaaatgacgattgaagaacttgatctttctgtt
cgttcatataactgcttaaagcgagctggtattaatactgtacaagagcttgcgaataag
acagaagaagacatgatgaaagtacgtaacttaggtcgtaagtctttagaagaagtaaaa
cataagttagaagagttaggtcttggcctacgtaaagaagactga
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