Gottfriedia acidiceleris: MY490_01685
Help
Entry
MY490_01685 CDS
T08082
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj03420
Nucleotide excision repair
gaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MY490_01685 (pcrA)
03430 Mismatch repair
MY490_01685 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaj03400
]
MY490_01685 (pcrA)
Enzymes [BR:
gaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY490_01685 (pcrA)
DNA repair and recombination proteins [BR:
gaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MY490_01685 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MY490_01685 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DUF3045
Motif
Other DBs
NCBI-ProteinID:
UPM54612
LinkDB
All DBs
Position
327659..329836
Genome browser
AA seq
725 aa
AA seq
DB search
MKTAEELLQGLNPMQKEAVKTVDGPLLIMAGAGSGKTRVLTHRIAYLLGEKGVAPWNILA
ITFTNKAAREMQERIFNLVGKDAEDIWISTFHSMCVRILRRDIDRIGFNRSFSILDTTDQ
LTVIKNILKEKNLDSKKFDPRSILGTISSAKNELQTAADYSRDAFTPYEKVVGEIYASYQ
DRLRKNHSLDFDDLIMMTISLFERVPEVLQYYQRKFQYIHVDEYQDTNHAQYKIVKLLAE
QFKNICVVGDSDQSIYRWRGADISNILSFEKDYEKAQVILLEQNYRSTQTILDAANAVIT
NNSNRKAKKLWTENGEGTPIHYFRAASEQDEGYFVAGKLAEWKKEGVRQYGDVAILYRTN
AQSRAMEEVLVKSNIPYKMVGGVKFYDRKEIKDVLAYLRFIANPNDEISFSRIINVPKRG
VGAASVDKIINYSIMNDLSLSDTLEQIDFVGLSGKITKAVGDFHAMTKNWQQMLDYLSVT
ELVEEVLDKTGYIQMLKDENTIESASRIENIEEFLTVTNAFEESSDDKSLVSFLTDLALV
SDIDQADKEESQSDEVILMTLHSAKGLEFPVVFLIGLEEGIFPHSRSLMDEEEMEEERRL
AYVGITRAEKDLYITNAQTRTLYGRTSVNQESRFINEIPDELLDRANKKVITERRAVSRP
AVAMKTTGGESLGWRVGDKASHGKWGIGTVVSVKGEGEAMELDIAFPSPVGIKRLLAKFA
PITKA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagcagaagaattattgcaaggtttaaatccaatgcaaaaagaagccgttaaa
acggttgatggtcctttattaattatggctggagcaggttcaggtaagactcgagttcta
acacatcgaatcgcgtatttattaggtgaaaaaggtgtcgctccttggaatattcttgcg
atcacatttacaaataaagcagctagagagatgcaggagcgtatttttaatctagttgga
aaagatgcagaagatatttggatttctacatttcactcaatgtgtgtacggatccttcgt
agagatattgatcggattggcttcaatagaagcttttctattttagatacaactgaccaa
ttaacagtaataaaaaatatccttaaagagaaaaacttagattcaaagaaatttgatcca
cgtagcatactaggaactattagtagtgcaaaaaatgaactacaaactgctgcagattat
tcaagagatgcttttactccatatgaaaaagtcgttggagaaatttatgcatcttatcaa
gatcgacttcgtaaaaatcattctttagatttcgatgatttaattatgatgacaattagt
ttgtttgaacgagttccagaagtactacaatattatcaacgaaaatttcaatatattcac
gtagatgagtatcaagatacaaaccatgcccaatataaaattgtaaaattacttgccgaa
caattcaaaaatatttgcgttgtaggtgattcagatcaatcaatttatcgctggcgtgga
gcagatatttctaatatactctcattcgaaaaagattacgaaaaagcacaagttattctg
ttagaacaaaactatcgttccactcaaacaattcttgatgcagcgaacgcagttatcacg
aataattcaaatcgtaaagcgaaaaagctatggacagaaaatggagaaggtactccgatt
cattatttcagagctgcctctgaacaagacgaaggatatttcgtagctgggaaactagcc
gagtggaaaaaagaaggcgttcgtcaatatggcgatgttgcaattctatatcgtacgaat
gcacaatcacgtgcaatggaggaagttttagttaagtccaatattccttataaaatggtc
ggcggagtaaagttctatgatcgtaaagagattaaagatgtacttgcttacttaagattt
attgccaatccaaatgacgagatcagtttttcaagaattattaatgtaccaaaacgtggt
gtaggtgcagcgtccgtagataaaattattaactatagcataatgaatgacttatcttta
tctgatactttagagcaaattgattttgttggattaagtggaaaaatcacaaaagcagtt
ggagattttcatgctatgacgaaaaactggcaacagatgctagattatttatcggtaact
gaactagttgaagaagtacttgataaaacaggctatatccaaatgttaaaagatgaaaat
acaattgaatctgcttctagaatcgaaaatattgaagagtttttaacagttacaaatgct
tttgaagaaagtagtgatgataaaagtttagtatcatttttaactgatttagcattagta
tctgatatcgatcaagcggataaagaagagtcacaatcagatgaggttatccttatgacg
cttcactctgcaaaaggattagagttcccagtagtctttttaatcggtttggaagaaggt
attttcccacatagccgttctttaatggacgaagaagaaatggaagaagaaagaagatta
gcgtatgtaggtataacacgtgcggaaaaggatttatatattacaaatgctcaaacacgt
acactttatgggcgtactagtgtaaaccaagaatctcgctttattaatgaaattcctgat
gagctattagatcgtgctaataagaaagtaataactgagcgccgtgctgtatctagacca
gcggtggcaatgaaaacaacaggtggagagtcactcggttggagagttggagataaagct
tctcatggtaaatggggaattggtacagttgtaagtgtaaaaggagaaggcgaagcaatg
gagttagacattgcattcccaagtcctgttggtattaagcgtttattagctaaatttgct
ccaattacgaaagcatag
DBGET
integrated database retrieval system
