Gottfriedia acidiceleris: MY490_01870
Help
Entry
MY490_01870 CDS
T08082
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K06714
arginine utilization regulatory protein
Organism
gaj
Gottfriedia acidiceleris
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaj03000
]
MY490_01870
Transcription factors [BR:
gaj03000
]
Prokaryotic type
Helix-turn-helix
Other families
MY490_01870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS
PAS_4
HTH_30
AAA_2
MCM
Mg_chelatase
AAA_16
AAA
PAS_9
AAA_7
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UPM54649
LinkDB
All DBs
Position
379289..380677
Genome browser
AA seq
462 aa
AA seq
DB search
MNATIPTNEMISAILNSIDESIHAVDKNGMTIFYNQVAADHDGVSVEEVLGKHVLEAFPS
LTKETSTLLKVLETKQAIIQQPQRYENIKGQFIDTVNTTIPIILDDQLIGAVEIAKDYST
IKSLGEKVLDLQARIKPQVKKGKAKQVHSYTISDILTDDPALIAVKNQVGKVANADSAVL
VVGETGTGKELFVQSIHHSSNRSEGPFIAQNCAALPESLLESILFGTTKGSYTGAIDRAG
LFELADGGSLFLDELNSMPLELQAKLLRVLEDGVVRRIGDQKTRKVNVRVIAAINESPLD
CVQNGIMRPDLYYRLNVFSLFIPPLRERNYDIELLTSFFVEQFNERFSKNIRNVEHTVFE
LFHQYNWPGNVRELKHTIEHAMIMAEGHTLTVKHLPIQLQHIKKSTETKGVQPLRTAMQE
MEISLIKQALLQTNSNIQQAAALLEIPRQTLQYKIQKLNIVV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaacaattccaactaatgaaatgattagtgccatattaaatagtatcgatgaa
tcaattcacgcagtcgacaaaaatggaatgactatattttataatcaagttgcggctgac
catgacggtgtttcagttgaagaggttctgggaaagcatgtactagaagctttcccttct
ttaacgaaagaaacaagtaccttattgaaagtactagaaacaaagcaagcgattattcaa
cagcctcaacgctatgaaaatattaaaggtcaatttattgatacagttaacacgacaatt
ccgattattttggatgatcaattgatcggtgctgtagaaattgcaaaggattattctaca
attaagtcgctcggtgagaaggttttagacttacaagcgaggattaaaccgcaagtgaaa
aaaggaaaagctaaacaagttcactcatatacgatctcagatatattaacggatgatcct
gctttaatagccgtaaaaaatcaagttggaaaggtagcaaatgcagactctgcagtactg
gtagttggtgaaactggaactggtaaagaactttttgtacagtcaattcatcatagttca
aatagaagtgaaggcccttttattgctcaaaactgtgctgctttaccagaatcattattg
gaaagtatactatttggtacgacaaagggtagttatacgggagcgatagatcgagcaggg
ttatttgaacttgctgatggtggaagcttgtttttagatgaactaaattcaatgccatta
gagctccaagctaagctactgagagtactagaggatggagttgttcgccggataggtgat
caaaaaactcgtaaagttaatgtaagagtaatcgctgcgattaatgaatcacctttagat
tgcgttcaaaacggtattatgcgaccggatttgtattatcgtttgaatgtgttttcattg
ttcatacctccgttaagagaaaggaattatgatatcgagctgctcacatctttttttgtt
gagcaatttaatgaacgcttctcaaagaatattcgaaatgtagaacatactgtatttgag
ttattccaccaatataattggcctggtaatgttcgagaattaaagcatacgattgagcat
gctatgattatggcagaagggcatactcttacggttaaacatcttccaattcaactacaa
catattaagaaaagtactgaaacaaaaggagttcagcctttacgtactgcaatgcaggag
atggaaatttcacttattaaacaagcattgctacaaacgaattctaatattcaacaagct
gcagcgctacttgaaatacctaggcaaactcttcaatataagattcaaaagttaaatatc
gtagtataa
DBGET
integrated database retrieval system
