Gottfriedia acidiceleris: MY490_01925
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Entry
MY490_01925 CDS
T08082
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
gaj
Gottfriedia acidiceleris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
PAS_4
AAA_5
HTH_50
AAA_2
AAA
PAS
PAS_10
Mg_chelatase
MCM
PAS_8
HTH_1
AAA_3
HTH_8
HTH_23
AAA_16
HTH_AraC
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UPM54656
LinkDB
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Position
391070..393202
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AA seq
710 aa
AA seq
DB search
MLSINEKQIRPVITIDIDQFKENDEIDLSNINEPFLFLRKQNQIVGYVQLNNITQSSNKK
RSIAFSKIISSSQSINSVSRLSEQISLTTLFQIIGEPISIVKEEEEMPIGYILREDILAE
LFKQENKSVDLLKSILTSIPMGTFVVDKNKVIVNCNDAGLKMIKSTSEKVINTKAETIFS
GEQVDNVFATGKTILNQIQISDDMGVLVDYSPIFVDNEVEGVVIVVQDLPMVEEMASEIE
YVKDLNKDLNAILSSIYDEILVVNRKGELIRYSENIIPGFWNVDLKELLGKSILEFENQG
LFTPSVTKLVLEKKKKVSIVQETINGRKVLAVGNPVFDENMEIERIIIASRDITETSRLK
TELKEMKKISEQYKKELEDIKSKDRFVKKLIYCSPKMEQIINQAKKIADFSSTVLLHGES
GVGKEVIAQAIHQLGNRSSKPFLKLNCGAIPENLLESELFGYIKGAFTGADQNKDGYFKQ
ADEGVLFLDEIGEMPLHLQVKLLRVLQEQEVIPVGSTKPIKVNVQIIAATNKRLEKMVEE
RTFREDLYYRLNVIPLNIPPLRERIEDISLLAFHFLQQLNEKYNKSFHLTPDAINVLEFY
SWPGNVRELQNIIERLVVSAEDQIINAEDVNQFLPNSYDFNKSKPVINKVIPLQEAIDYV
EEQLIVLAMKQYKTTTKAAQVLGISQSSVSRKYQKIMNEKNMNSDFMSFK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttatcaataaatgagaaacaaataagaccagtcatcacaatagatatcgatcaattt
aaagaaaatgatgaaatcgatttatccaatataaatgaaccctttttattcttacgtaag
caaaaccagattgttggttatgttcaattaaataatattactcaaagtagtaataaaaag
agaagtatagcattctcgaagattattagttcttctcaatcgataaatagtgttagtcgc
ttaagtgagcaaatttcattaactacactatttcaaattattggtgaaccaatctcaatt
gtaaaagaagaggaagaaatgccaattggttacatacttcgtgaagatatattagcggag
ctttttaaacaagaaaataaaagtgtagatttattaaagagcattttaacatcgataccg
atgggaacatttgtagtagataaaaataaagttattgtaaattgcaatgatgctgggttg
aaaatgattaaatcaacatcagaaaaagtaattaatacaaaagcagaaactatattcagc
ggcgaacaagtcgataatgtatttgcgacaggtaaaacaattcttaatcagattcaaatt
agtgacgatatgggtgttcttgttgattatagcccaattttcgttgataacgaggttgaa
ggagttgtcattgtcgtacaagatctcccaatggttgaagaaatggcctccgaaatagaa
tatgtaaaagatttaaataaagatctgaatgccattttatcgagtatttatgatgaaata
cttgtagtaaatcgcaagggtgagctaatccgttacagtgaaaatataatacctggattt
tggaatgtagatttaaaagaactacttggaaagagtattttagaattcgaaaaccaagga
ctttttacgccatcagttacaaaactagttttagaaaaaaagaagaaagtctcaattgtt
caagaaacaattaatggacgtaaagtacttgcggtaggaaatccagtttttgatgagaat
atggaaattgaacgtattattattgcttctagggatattacagaaacttcacgacttaaa
acggaattaaaagaaatgaagaagatttctgagcaatataaaaaggagcttgaagatata
aagagcaaggatcgttttgtcaaaaaactgatttactgtagcccaaaaatggagcaaatc
attaatcaagcgaaaaaaattgctgatttttcttccactgtgttactgcatggagagtct
ggtgtagggaaggaagtaattgcacaggctattcatcaattaggaaaccgttcttcaaaa
ccgtttttaaaattaaactgcggtgcaatacctgaaaatctactggaaagtgagcttttt
ggttatattaaaggagcgtttacaggagcagatcaaaataaggacggctattttaagcaa
gcagatgaaggcgttttatttttagatgaaattggtgaaatgccattacatttacaagta
aaactgcttagagtccttcaagaacaagaagtaattccagtcggaagtacaaagccaatt
aaagtaaatgtgcaaattattgcagctacaaataaaagattagaaaaaatggttgaagaa
cgaacatttagggaggacttgtattatcgactaaatgtaatacctttaaatattccacca
ttaagagaaagaattgaagatatctcattattagctttccattttttacagcaattaaat
gaaaagtataataagagttttcatcttactccagatgcaattaacgtattggaattttat
tcctggccagggaatgtcagagaacttcaaaacatcatagaaagattagtcgtttctgct
gaagatcaaattattaatgcagaggatgttaatcaattcttaccaaatagctatgatttt
aataaatctaaaccagttattaataaagtaattcctctacaagaagcgattgactatgta
gaggagcaactcattgtgcttgcaatgaagcaatataaaacaacaacgaaggctgcgcag
gttttaggcattagccagtcatcggttagtcgtaagtatcaaaaaataatgaatgaaaag
aatatgaatagtgactttatgtcatttaaataa
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