Gottfriedia acidiceleris: MY490_02025
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Entry
MY490_02025 CDS
T08082
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MY490_02025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaj03000
]
MY490_02025
Transcription factors [BR:
gaj03000
]
Prokaryotic type
Helix-turn-helix
Other families
MY490_02025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_1
TPR_12
TPR_2
TPR_10
TPR_8
MPTase-PolyVal
Ribosomal_S21
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UPM54674
UniProt:
A0ABY4JLH7
LinkDB
All DBs
Position
complement(418214..419434)
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AA seq
406 aa
AA seq
DB search
MYEGKIIKYYREKSQMTQEQLGKGICSSTHISKIERSQTEYATEIIALLSVRLGIKIENE
ILKLKNIKMRINSWQQSIAMQLFDEIEEINLELEREELIQISNYVNQYKLLRIRYLLMSN
LMNEAKELINEIKKIKHKLSPYEINLFRHVLGIYHLTNHEPLLAIQVLKKINIEEYANEE
YYYHLASAYHSNDLPVLAYFYADKARQYFKSINSYLRVIDSEMLMLIQVKDNEEFSETIK
RFENLIQSCEICRSSDRKARVYHNLAFEYYRRKNYELAKKYYFESMKLKDSNSIPYLLSL
EGYIRSSYYGELLPKGELLQYVGKGFALASQKNDKLFINLFILLDFLILEKEQEYHQYLA
DHSLPLFKKLGFAYLINQSEKELFNYYFKRKQTRKALGMANTLINL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggggaaaatcataaaatattatcgagaaaaatctcagatgacacaagaacaa
ttagggaaaggaatttgttctagtacgcatattagtaaaatagaaagatctcaaacagaa
tatgcaactgaaattatagctctactatcagtacgacttggaataaaaatcgaaaatgag
attttaaaattaaaaaatattaagatgcgtataaatagttggcagcagtctattgcaatg
cagctatttgacgaaatagaagaaattaacttagaacttgagcgagaagagttaattcaa
atttcaaattatgtaaatcaatataaattacttcgcatcagatatttattaatgagtaat
ttaatgaatgaagcaaaagagctcattaatgaaataaaaaaaataaaacacaaattgtca
ccttatgaaataaatctttttagacatgtgctaggtatttatcacctaacgaatcatgaa
cctttacttgccattcaagttttaaagaaaattaatattgaagaatatgcaaatgaggaa
tattattatcatttagcttctgcttaccattctaacgatttacctgttttggcttacttt
tatgctgacaaagcccgtcagtatttcaaaagtattaattcctatcttcgtgtaatcgac
tccgaaatgcttatgctaatacaagttaaagataatgaagaattttcagagacgattaag
agatttgaaaacttaatccaaagctgtgaaatttgtagatcatcagaccgaaaagcaagg
gtatatcataatttagcttttgaatattaccgaagaaaaaattatgagttagctaaaaaa
tactattttgagtctatgaaattgaaggattccaattctatcccctatttactttcccta
gaaggatatatacgcagttcctattatggagaactattacctaaaggtgaattattacaa
tatgtaggtaaagggtttgctctcgcttcacaaaaaaatgacaaactttttatcaattta
ttcatcttattggactttttaatcttagaaaaagaacaagaatatcaccaatatttggcg
gatcattcattaccattatttaaaaaactaggattcgcttatttaatcaatcaatctgaa
aaagaattgtttaactattattttaaacgcaaacaaacccgtaaagcactaggtatggca
aatactttaatcaatctataa
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