Gottfriedia acidiceleris: MY490_03175
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Entry
MY490_03175 CDS
T08082
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MY490_03175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaj03019
]
MY490_03175
03009 Ribosome biogenesis [BR:
gaj03009
]
MY490_03175
Enzymes [BR:
gaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MY490_03175
Messenger RNA biogenesis [BR:
gaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MY490_03175
Ribosome biogenesis [BR:
gaj03009
]
Prokaryotic type
rRNA helicases
MY490_03175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Plasmodium_HRP
Motif
Other DBs
NCBI-ProteinID:
UPM54888
UniProt:
A0ABY4JPV8
LinkDB
All DBs
Position
688812..690812
Genome browser
AA seq
666 aa
AA seq
DB search
MNKFSSLGLSEELTEYLTELGITEPTPIQEKAIPIVFEGKDLIGQAQTGTGKTFAFLFPI
LEKINVELPHTQALVVAPTRELALQITAEAKRIVSEDFGVLAVYGGQDVEQQARKLKSGA
HLIIATPGRLLDHLRRGTIKLDKVDFLVLDEADQMLHIGFLHEVEDIINQTPVSRQTLLF
SATMPDQIQSLAKRYMKKPEIIKVKAKRITLDEIEQLIIETTDRGKLNALLNQIKEAEPF
LAIIFCRTKRRANKLNEQLKGKGLLSEELHGDLTQGKREKVMKLFREAKIQYLVATDVAA
RGIDVEGVTHVFNYDIPLDTESYVHRIGRTGRAGDTGIAITFATPKDFQDMRVIEKELNL
SIKRIEMERGDSSGRADRTENAGRTGRPRNAGRTERSRNVGRAERSASAGRAERTGNSGR
AERSASAGRAERTGNSGRAERTGNADRAERTGNAGRAERTGNAGRAGRTGNAGRAERTGN
SGRAERSASAGRAERTGNSGRAERTGNADRAERTGNAGRAERTGNAGRAERTGNAGRAER
TGNSGRAERTGNAGRAERSGSAGRAERTGNAGRAERTGNVGRAERSGSAGRAERTGNAGR
AERTGNAGRAERSGSAGRAERTGNAGRTERTGNTGNSTRGERTEGVGRARSTGRTRNEGK
SGRRSR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattttctagtttaggtttaagtgaggaattaactgagtatttaactgaatta
gggataactgagcctactccgattcaagagaaggcaattccaattgtatttgaaggtaag
gatttaataggacaggcgcaaacaggaactggtaaaacatttgcgttcttatttccaatc
ctagaaaaaattaatgtagaattaccacatacacaagcattagtcgttgctccaacaagg
gagttggcccttcaaataactgctgaggctaaaaggattgttagtgaagattttggagta
cttgctgtatacggcggacaagatgttgaacaacaagctcgtaaactaaaaagtggtgca
catttaatcattgcaacacctggtagacttttggaccatctaagacgaggaacaataaaa
ttagataaagttgattttctagtgctcgatgaagcagaccaaatgttacatattggattt
ttacacgaggtagaagatattatcaatcaaactcctgtttcgagacaaaccttattattc
tctgctacaatgccagaccaaatccaatcacttgcaaagcgttacatgaaaaagccagaa
attataaaagtaaaagctaaaagaatcacactagatgaaattgaacaattaatcattgaa
acaacagatcgaggaaaattaaatgccttattgaatcaaatcaaagaagcagagccgttt
ctagcaatcattttttgcagaacaaaaagaagagctaataaattaaatgaacagctaaaa
ggaaaaggtcttttatctgaagaactacacggagatttaacccaaggcaagcgcgaaaaa
gttatgaaattgttccgtgaagctaaaatacaatatcttgtagcaacagatgtagcagct
agaggaattgatgtcgaaggtgttactcacgtattcaactatgatataccattggataca
gaaagctatgtacatcgaattggaagaacaggacgtgcaggagatactggtattgcgatt
acatttgctactccaaaagattttcaagatatgagagtaattgaaaaagagcttaatctt
tcaattaagagaatagaaatggaaagaggagatagttcaggcagagcggatcgaacagaa
aatgcaggcagaacaggaagaccgagaaatgcaggcagaacagaaagatcgagaaatgta
ggcagagcggaaagatcagctagtgcaggtagagcagaaagaactggaaattcaggcaga
gcggaaagatcagctagtgcaggtagagcagaaagaactggaaattcaggcagagcggaa
agaactggaaatgcagacagagcggaaagaactggaaatgctggtagagcagaaagaact
ggaaatgcaggcagagcgggaagaactggaaatgcaggtagagcagaaagaactggaaat
tcaggcagagcggaaagatcagctagtgcaggtagagcagaaagaactggaaattcaggc
agagcggaaagaactggaaatgcagacagagcggaaagaactggaaatgctggtagagca
gaaagaactggaaatgcaggcagagcagaaagaactggaaatgcaggtagagcagaaaga
actggaaattcaggcagagcggaaagaactggaaatgcaggtagagcagaaagatcaggt
agtgcaggcagagcagaaagaactggaaatgctggtagagcagaaagaactggaaatgta
ggtagagcagaaagatcaggtagtgcaggtagagcagaaagaactggaaatgcaggcaga
gcggaaagaacgggaaatgcaggcagagcagaaagatcaggtagtgcaggcagagcggaa
agaactggaaatgcaggtagaacggaaagaacgggaaatactgggaattccacacgaggc
gaaagaacagaaggtgttggaagagcaagaagtacagggagaacaagaaatgagggcaaa
tctggtaggagaagtagataa
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