Gottfriedia acidiceleris: MY490_04600
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Entry
MY490_04600 CDS
T08082
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj03030
DNA replication
gaj03410
Base excision repair
gaj03420
Nucleotide excision repair
gaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MY490_04600 (polA)
03410 Base excision repair
MY490_04600 (polA)
03420 Nucleotide excision repair
MY490_04600 (polA)
03440 Homologous recombination
MY490_04600 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaj03032
]
MY490_04600 (polA)
03400 DNA repair and recombination proteins [BR:
gaj03400
]
MY490_04600 (polA)
Enzymes [BR:
gaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MY490_04600 (polA)
DNA replication proteins [BR:
gaj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MY490_04600 (polA)
DNA repair and recombination proteins [BR:
gaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MY490_04600 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MY490_04600 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
NYN_YacP
Taq-exonuc
HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UPM56424
UniProt:
A0ABY4JST8
LinkDB
All DBs
Position
974436..977063
Genome browser
AA seq
875 aa
AA seq
DB search
MLKKKLVLIDGNSIAYRAFFALPLLSNDKGVHTNAIYGFTMMLMKILEDEKPTHMLVAFD
AGKTTFRHSTFKEYKGGRQKTPPELSEQFPLVRQLLDTYGIARYELENYEADDIIGTLAG
QASKDEYEVKVISGDRDLLQLVDDRITVSMTKKGITEVEEYTPAAIHEKYEITPDQIIDM
KGLMGDKSDNIPGVPGIGEKTAIKLLKQFQTVEGLYENIEEVSGAKLLQNLSENKEQALM
SKQLATINKNSPIELTLNDTTLPEADTNKVAEFFKSLGFTSLLAKLDIKESIKDLEEINY
EVLDSIEEKHLANHSSLIVEMIGENYHTEEIQGFGLSNEKGHFFIPTAVGLESDLFKKWL
EDERVYKNVYDAKGAYVALKWRGINLNGVNFDPLLASYIYDPAQSNKEFADIVNSRIDFS
IQTAETIYGKGAKQTKPSDEVLSEFIVRKTIAISKLKETLEESLRKNSQFELLTELELPL
TFILGDMEFEGVTVREETLRTMGSELANTLKELEESIYELAGEKFNINSPKQLGVILFEK
LNLPSGKKTKTGYSTSADVLEKLEAEHEIIRLILHYRQVGKLNSTYVEGLLKVINESDSK
VHTRFNQVLAQTGRLSSIDPNLQNIPIRLEEGRKIRKAFVASKKDWLIFAADYSQIELRV
LAHIAQDDNLMDAFKNDFDVHTKTAMDVFHVSADEVTSNMRRQAKAVNFGIVYGISDYGL
SQGLGITRKEASIFIEKYFASFPKVKDYMSDIVQKAKLEGFVSTILNRRRYIPEISSSNF
NVRGFAERTAMNTPIQGSAADIIKKAMILLDERLKVEKLQAKLILQVHDELILEAPKEEL
VILEKIVPEVMEHAVELVVPLKVDYNFGDSWFEAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
attttgaagaagaaattggttttaattgatgggaatagtattgcctatagagctttcttt
gcattgcctcttttgagtaatgataaaggtgtacatacaaatgcaatttatgggtttaca
atgatgttaatgaagattcttgaagatgagaaaccaacccatatgcttgttgcatttgat
gcagggaaaacaacatttagacatagtacctttaaagaatataaaggtggaagacaaaag
actccaccagagttaagtgaacagtttccacttgttcgtcagctattagatacatacgga
attgcacgttatgaattagagaattatgaagcggatgacataattggtacacttgcaggt
caagcttctaaagatgaatatgaagtaaaggttatctcaggtgatcgagatttattacaa
ctagttgatgaccgtattacagtaagtatgactaaaaaaggtattactgaagttgaagaa
tatactcctgcagcgattcatgaaaagtatgagattacacctgatcaaattattgatatg
aaaggattaatgggtgataaatctgataatattccaggtgtaccaggtattggggaaaag
actgcaattaaacttttaaaacaatttcaaacagtagaaggtctgtatgaaaatatagag
gaagtaagtggagctaagctacttcaaaatttaagtgaaaataaagaacaagccttaatg
agtaagcaattagcgacaattaataaaaactcaccaattgaattaactttaaatgacaca
acgcttcctgaagccgatacgaataaagttgcggaattttttaaatctcttggatttaca
tcattattagctaaattggacatcaaagaatcgattaaagatctagaagagattaactat
gaagtactagattcaattgaagagaaacatctagcgaatcattcaagcttaatcgttgaa
atgatcggagaaaattatcatacagaagaaattcaaggatttggtctttcaaatgaaaaa
ggtcatttctttattccaacagctgtagggttagagtcggatttatttaaaaaatggctt
gaggatgagcgtgtttataaaaatgtatatgatgcaaaaggtgcttatgttgcactaaag
tggagaggaattaatttaaatggtgttaatttcgatccgttacttgcttcatatatatat
gacccggcccagtctaataaagaatttgctgatattgtaaatagtagaatagatttttca
attcaaactgcagaaacgatttatggtaagggtgcaaagcaaactaagccatcagatgaa
gttttatcagaatttattgttcggaaaacaattgctattagtaaattaaaagaaacatta
gaagaatcattacgaaaaaacagtcaatttgaactactaaccgaattagaattaccatta
acttttattttaggtgatatggaatttgaaggggtaacagttagagaagagactcttcgt
acgatgggttcagaactagctaatacgttaaaagagcttgaagagtctatttatgagtta
gctggtgaaaaattcaatattaattcaccaaagcaattaggtgttatattatttgaaaag
ttaaatttaccatctggtaaaaaaacaaaaactggttattcgacttctgctgatgtactt
gaaaaattagaggcagaacatgaaatcattcgattaattctccactatcgtcaagttggg
aaattaaattctacttatgtagaaggtttattaaaagtgataaatgaatcagattctaag
gttcatacacgatttaatcaagtattagcacaaactggtcgcttaagttcaattgatcct
aacctgcaaaacattcctattcgtttagaagaaggtagaaaaattagaaaagcttttgtc
gcatctaaaaaagactggctgatctttgctgctgattattctcaaattgaattaagggta
ttagctcatatagcacaagacgataatttaatggatgcattcaaaaatgactttgatgtt
catacaaagactgcaatggatgttttccatgttagtgctgatgaggtaacaagtaatatg
agaagacaagcaaaagctgttaactttgggattgtctatggaattagtgattatggatta
tcacaagggttaggaattacaagaaaagaagcgtctatatttattgaaaagtactttgct
agttttccaaaagtaaaagattatatgtcagatattgttcaaaaggctaaactagaagga
tttgtaagtactattttaaatagacgtcgttatattcctgaaatttcaagctcaaacttt
aatgttcgtggatttgctgaaagaacagcgatgaatacgccaatacaaggtagtgcagca
gatattataaagaaggctatgattttattagatgagcgtcttaaagtagaaaaacttcag
gcaaaattaattttacaagtacatgatgaattaatattagaagctccaaaagaagaatta
gtaattttagaaaaaattgtaccagaagtaatggaacacgcagtcgagctagtagtgcca
ttaaaagttgattataattttggagattcttggtttgaagcaaaataa
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