Gottfriedia acidiceleris: MY490_05830
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Entry
MY490_05830 CDS
T08082
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj03030
DNA replication
gaj03430
Mismatch repair
gaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MY490_05830 (holA)
03430 Mismatch repair
MY490_05830 (holA)
03440 Homologous recombination
MY490_05830 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaj03032
]
MY490_05830 (holA)
03400 DNA repair and recombination proteins [BR:
gaj03400
]
MY490_05830 (holA)
Enzymes [BR:
gaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MY490_05830 (holA)
DNA replication proteins [BR:
gaj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MY490_05830 (holA)
DNA repair and recombination proteins [BR:
gaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MY490_05830 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
T6SS_TssF
Motif
Other DBs
NCBI-ProteinID:
UPM55361
LinkDB
All DBs
Position
1231097..1232101
Genome browser
AA seq
334 aa
AA seq
DB search
MINDLHKKLKKNVSPMYLLVGTEDFLLQEAENLIVKAALQGDIDDFNYQTYDLKESYLSE
ALEDAQTPSFFGGNKVIIIKSCLFLTAQKEKIVQDIEPLFDYIENPAPFTTVVFVAPFEK
LDERKKVTKAIKKLVELVECHPVETSNLDGWINERFTGNVTITKEAIDKLKLLVGNNLSI
LKLECEKLQLFIGNEGEVDADLVEMMVAKTIEQNVFSLIEKTAVRQTTEALKILHELLFI
GEEPIKIVALLASQFRLLYGIKQLSSSGYSNNQIASSVGVSPGRVFYGQKQANNFQASEL
KEAIRLIAEVDYKMKTGQGDKVMILEMLILQLNK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgatttacataaaaaattgaaaaagaatgtgtcgccaatgtatttattggta
ggtactgaagattttttacttcaagaagcagaaaacttaatcgtgaaagcagctttacaa
ggagatattgatgattttaactatcaaacatatgatttaaaagagtcttatttaagtgag
gctcttgaggatgctcaaacaccgtcctttttcggtggaaacaaagtcatcatcataaaa
tcatgtttgtttttaacagcccaaaaagaaaaaattgtacaagacatagaaccacttttt
gattatattgaaaatcctgcgccttttactacagttgtttttgttgctccttttgaaaaa
ttggacgagcggaaaaaagtaacaaaagcgataaaaaaactagtagagctagttgaatgt
catcctgttgaaacgagtaatttagacggttggattaatgagcggttcactgggaatgta
acgattactaaagaagcaattgataaattaaaattactcgttggaaataatttatcaatc
ttaaaacttgaatgtgagaagctacaattgtttattgggaatgaaggcgaagttgatgca
gacctagtagaaatgatggtagcaaaaaccattgaacaaaacgttttttctcttattgaa
aaaacagcagtaagacagaccactgaggcacttaaaattcttcatgaattattatttata
ggtgaagaaccgataaaaatagttgcattgttagctagtcagtttaggttattgtacgga
ataaaacaattatcaagtagtggatattcaaataatcaaattgcctcttctgttggtgta
tcaccaggaagagtgttttatggacaaaagcaagcgaataactttcaagcaagtgaattg
aaagaagcaatacgattaattgctgaagttgattacaaaatgaagactggtcaaggagat
aaggtaatgatccttgaaatgttgattctacaattaaataaataa
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