Gottfriedia acidiceleris: MY490_07365
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Entry
MY490_07365 CDS
T08082
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
gaj
Gottfriedia acidiceleris
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaj03019
]
MY490_07365
03009 Ribosome biogenesis [BR:
gaj03009
]
MY490_07365
Enzymes [BR:
gaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MY490_07365
Messenger RNA biogenesis [BR:
gaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MY490_07365
Ribosome biogenesis [BR:
gaj03009
]
Prokaryotic type
rRNA helicases
MY490_07365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PRAI
CMS1
Motif
Other DBs
NCBI-ProteinID:
UPM55645
LinkDB
All DBs
Position
1561243..1562550
Genome browser
AA seq
435 aa
AA seq
DB search
MAISFKNFQLKPFILEAIEKKHFTEPTEIQQKIIPQVKTGRSVIGQSQTGSGKTHAYLIP
TINTLDPSVDQVQLVITAPTRELATQIYNDVQAIIECCPEDEQLTAKNFVGGTDYKRTVE
KLKKQPHIVIGTTGRIKDLVNDNVLLVHTTKYLVVDEADLMLDMGFIHDVDQVASKMPKK
LQMLVFSATIPEKLKPFLKKYMENPEHIHINPQQLSAQKIEHIIVPSRHKDKVKMAKDIL
LSFQPYLAIVFTNTKKKAEEVATQLSSYGLKVGQIHGDLSPRERKKMMKQIQDLEFQYIV
ATDLASRGIDIEGVSHVINIELPADLDFYVHRVGRTGRANFSGTAITIYDQEDEQALDKL
QDRGITFEHRELKKGEWVDLGPRSKRKLRKKTDRSLDAVAGKAIKKPSKVKPGYKRKLNE
QRESFKNKVKRKTSR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttcatttaaaaattttcaattaaaaccatttattttggaagcgatagagaag
aaacactttacagaaccaacagaaattcaacaaaagattattcctcaagttaaaactgga
cgtagtgtaatcggtcaatcgcaaacagggtcaggaaagactcatgcatacctaattccg
acaattaatacattagatccatctgtagatcaagtgcaattagtaataactgctccaact
cgtgaattagcgactcaaatttataatgatgtccaagcaatcattgaatgttgtccagaa
gatgagcaattaactgcaaaaaacttcgttggaggaaccgactacaaacgtactgttgaa
aaacttaaaaaacagccacatatcgtaatcggtactactggccgtattaaagatttagta
aatgataatgtattattagttcatactacgaagtatttagtagtggatgaagcggactta
atgttagatatgggatttatccatgatgttgaccaagttgcatcaaaaatgccgaagaaa
ctacaaatgcttgttttttcagcgacaattcctgaaaagcttaaaccgtttttgaaaaag
tatatggaaaatcctgaacatattcatattaatccgcaacaactttctgctcagaaaatt
gaacatattattgttccaagtcgccataaagacaaagttaaaatggctaaagatatttta
ttaagttttcagccatatttagcaattgtttttacaaatacgaagaaaaaggctgaagaa
gttgctactcaattatcatcatatggcctaaaagttggtcaaattcacggtgatttaagt
cctcgtgaacgtaaaaaaatgatgaagcaaattcaagatttagagtttcaatatattgtt
gctacagacctagcttcccgaggaatcgatattgaaggggtaagtcatgtaataaatatt
gaactaccagcagatttagacttttatgtccaccgtgtaggtcgtacagggcgtgctaac
ttctctggaactgctattacaatttatgatcaagaagatgaacaagcattagataaactt
caagatcgtggcattacatttgagcatcgcgaacttaaaaaaggtgaatgggttgattta
ggacctcgctcaaaacgtaagctccgtaaaaaaactgatcgaagtttagatgcagttgct
ggtaaagcaatcaaaaagccatctaaagttaaacctggctataaacgtaaactaaatgaa
caaagagaatcatttaaaaataaagtgaaaagaaaaacaagtagatag
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