Gottfriedia acidiceleris: MY490_10090
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Entry
MY490_10090 CDS
T08082
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj03410
Base excision repair
gaj03430
Mismatch repair
gaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MY490_10090
03430 Mismatch repair
MY490_10090
03440 Homologous recombination
MY490_10090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaj03400
]
MY490_10090
DNA repair and recombination proteins [BR:
gaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MY490_10090
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MY490_10090
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MY490_10090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF502
Motif
Other DBs
NCBI-ProteinID:
UPM56152
LinkDB
All DBs
Position
complement(2073673..2075124)
Genome browser
AA seq
483 aa
AA seq
DB search
MEWGKSQRVISKAYLSLYGMTSSTILSQALFELGGHVDTRLPLRTEGYGLSKEIVNSLSK
SYSLIITVDNGSSAHDALKAAKIKGIDVIVTDHHEVLNGRPNCLAFINPKRIDNHYPNPH
LCGAGVALKLVQAIYLKLKREWIGESFKFFDLATLGTIADVVPLIGENRIICWHGLRKIK
NHPHPAFKKIIDKLRIKTVDSSTFGFTLGPIFNACGRIGDPNFAAAILRSTDPTNEEIDQ
LIALNDKRKKVTAEQFLTIQEKIQSENLLNDDVLVINGDFHKGIIGILASRASNYYKKPT
IVISSDGTGSARSLQGSQFSIINCISGCENLLKKFGGHPMAAGFSISLTDKQVNLFRTNI
QKEATKQQICTPQQFYISNIPINTFPIELMSDLPILEPYGMGMPKPIFKSNATKIASSQY
FGKEKEHLKLLIKDKNVLGFSQAHIFHKLENPSVLDLFYSVNCHKKEDFFLHDLMKIEDC
LEI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtggagtgggggaaaagccagagagtcatatcaaaggcttacctatcactatatgggatg
acttcttcgactatattaagccaggctttatttgaattgggtgggcatgtagacacacga
ttacctttaagaacagagggttacggattatcaaaggaaatagttaacagcctttcaaaa
tcttattcattgattattacagttgataatgggtcaagtgcacatgatgctttaaaagca
gcgaaaataaaaggaattgatgtgattgtcactgatcatcacgaagtattaaatgggaga
cctaattgtttggcttttatcaatcccaaacgtattgacaaccactatccgaatcctcac
ttatgtggagcaggggttgcattaaagctagtacaagctatttatcttaagttaaaaaga
gaatggattggtgaatcttttaaatttttcgacttagcaactttaggaacaattgcagat
gtcgtgccattaattggagaaaaccgaattatctgttggcacggattacgaaaaataaaa
aatcatcctcatcctgcattcaaaaaaataatagataaattaaggattaaaacagttgat
agttcaacatttggctttactttgggtccgatttttaatgcgtgcggacgaattggagac
ccaaattttgctgctgccattctacgttctactgatccaactaatgaagaaattgatcaa
ctaattgcattaaatgacaaacgaaaaaaagtaacagcagaacaattcttgacgattcaa
gaaaaaatacagagtgaaaatttactaaacgatgacgttttagtgataaacggagatttt
cacaaagggattatagggattcttgcctccagagcttctaactattacaaaaaaccaaca
attgttatatcaagtgacggtactggatctgcaagaagtttacagggaagtcaattttca
attattaattgtatttctggttgtgaaaatttattgaagaaattcggtggacatccaatg
gctgctggattttcaattagtttaactgataaacaggttaatttatttcgtacaaacata
caaaaagaagcgacaaaacaacaaatttgtacaccacaacaattttatatcagtaatatt
ccaatcaacacatttcctatagaattgatgtctgatttacctattttagaaccttatgga
atgggtatgccaaaaccaatttttaaaagtaatgcaaccaaaatagcatcatctcaatat
ttcggaaaagaaaaagaacatttaaaattactaattaaagataaaaatgttttaggattt
tcacaggcacatatatttcataaacttgagaatccctctgtgttagatttattttattcg
gttaattgtcataaaaaagaggacttttttttacatgatttgatgaaaatagaagactgt
ttggaaatttga
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