Gottfriedia acidiceleris: MY490_10170
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Entry
MY490_10170 CDS
T08082
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gaj
Gottfriedia acidiceleris
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaj03400
]
MY490_10170
DNA repair and recombination proteins [BR:
gaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MY490_10170
Archaeal homologous recombinant proteins
MY490_10170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Como_SCP
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
UPM56165
LinkDB
All DBs
Position
2085628..2086782
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AA seq
384 aa
AA seq
DB search
MKFIHTADWHLGKIVHGVHMTEDQRFILDEFISIIKDEKPDAVVIAGDLYDKSISPTEAI
ELLNEVFHKIVIECNTPILAIAGNHDSAERIEFGSRFMEKEGLYLVGKFQTPFKKVILND
DDGEVHFYLIPYAEPSIVRFILQNDDIHSHDDAMKAIINKIRDEELDPSVRNVFVGHAFV
TNNGEPSDEETEGERTLSIGGAEYVSHHNFKHFNYTALGHLHRAHFVGNQSIRYSGSPLK
YSLSEENHKKGCLIVEIKADGELSVVKKDFHPKRDLRSIEGTIEEIRQHSVNDDYVFVKL
TDEHMVVHPMEQIRTVYPNAMHVSRKRTTLQTDKTNQLSLVEKQSKNQLELFQSFYKEMK
NEDLKIEDEQYMKEIIQEIFVREE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattcatacagcagattggcaccttggtaaaattgtacatggtgtacatatg
acagaagaccaacgatttatattagatgaattcatttcaatcattaaagatgaaaagcca
gatgcagttgttatagcaggtgatttatatgataaaagtatatctccaactgaagcgatt
gaactattaaatgaggtattccataaaattgtaattgaatgtaatacgcccatccttgcg
attgctggaaatcatgatagcgctgaacgaattgaatttggtagccgttttatggaaaaa
gaaggcttatatctagtaggaaaatttcaaactccatttaagaaagttattctgaatgat
gatgatggtgaagttcatttttatttaattccatatgccgaaccgagtattgtacgtttt
attttacaaaacgatgatattcattcacatgatgacgctatgaaagcaatcataaataaa
ataagagatgaagaattagacccatcagtacgaaatgtatttgttggacatgcatttgtt
acaaataatggtgagccttcagatgaggagacagagggtgaacgaacactctccatcggt
ggagctgaatacgtatcacatcataattttaaacattttaactatacagccctaggacat
ttacatcgggcacattttgtaggaaatcaatcaattcgttattctggatcacctttaaag
tactcactttctgaagaaaaccataaaaaaggctgcttaattgttgaaataaaagctgac
ggtgagctatcagtcgttaagaaagattttcatccaaaacgagatttaagatcgattgaa
ggaacaattgaggaaatcagacagcattctgtgaatgatgattatgtatttgtaaaatta
actgatgagcatatggtagtacatccgatggagcaaatcagaacagtttatccaaatgca
atgcatgttagtcgaaaacgaacgacattacaaacagataaaacaaatcagctgagttta
gtggaaaaacaatcaaaaaatcaacttgagttgttccaatctttttataaagaaatgaaa
aatgaagatttgaaaattgaagatgaacaatacatgaaagagattattcaagaaatcttt
gtaagggaggaatag
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