Gottfriedia acidiceleris: MY490_11055
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Entry
MY490_11055 CDS
T08082
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj03420
Nucleotide excision repair
gaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MY490_11055
03430 Mismatch repair
MY490_11055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaj03400
]
MY490_11055
Enzymes [BR:
gaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY490_11055
DNA repair and recombination proteins [BR:
gaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MY490_11055
MMR (mismatch excision repair)
Other MMR factors
MY490_11055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
SLFN-g3_helicase
PhoH
AAA_30
AAA_11
DEAD
ResIII
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UPM56330
LinkDB
All DBs
Position
2277627..2279735
Genome browser
AA seq
702 aa
AA seq
DB search
MTSQQFKEEQQYLNTIQSEMERQLTKLEGIPVYTGSDVTEQVLEGIRDTNRRNLRLAKNE
PYFGRMDFQEEYKDSVPVYIGKVGISEQSTENPLIIDWRAPIASMFYSFTGGDDPAYYES
PEGIIEGIIYLKRNIVIRNKNLQRVVDTYVKGDQDVSTTDDFLLYRLSENKDNRLKDIVS
TIQSEQNDIIRSSKNTPLVIQGVAGSGKTTVALHRLAFLIYQYRETLRADKMIIFAPNNM
FLDYISNVLPELGVGGIQQTTFSDWALNTLDHEVKLKDSSENLNKWFATGANRLEINRFS
PGKWKGSTHFMSYIDRCMDMYEASAVPEKDFKPWKNRKIDKETLKHWFSIEYKHYPLAKR
RERIVARLKKWIDNELKVIEETNIRKEKKKKATQYLNSYMKQWPKHTALSFYKSLFTTTK
DASFVDEIPADIIKFTSLNCKKKEMDQEDLAPLVYIHNRLFGIESKQKFHHVIVDEAQDF
SPFQIALLNKMTLGNSFTILGDLSQAIHEYQGINTWDEFLEIFNKKEVTYYELNRSYRST
MEIIHFANEIIKKANIPVSLANPVFRSGEQVKIQEVDHTNRIQVIINSIHQLKKDKMDTI
AIIGRTEDECAILHSELFAAGEEVSFIHSKERKYEGGISVVPVYLSKGLEFDAVLLVDVD
DAHYEETKQDAKLLYVGCTRALHNLIVLYTGNKSPLIGKSPL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgacatcacaacaatttaaagaagaacaacagtatctaaacacaattcaatctgaaatg
gaacgacagctaacgaaacttgaagggattcccgtttacactggtagtgatgtaaccgaa
caagtacttgaaggaattcgagatacgaatcgaaggaatcttcgcttagcaaaaaacgaa
ccatattttgggagaatggattttcaagaggagtataaagattcggtacctgtttacata
ggaaaagtaggaatatcagaacaatctacagaaaacccattgataattgattggcgtgca
ccaattgcaagtatgttttattcgtttacaggaggggacgatcctgcctattacgaatct
ccggaagggataatcgaagggataatctatttaaaacgaaatatagtaatccgcaacaaa
aatctccaacgtgttgtagatacatatgtaaaaggcgatcaagatgtatcaactactgat
gattttcttctatatcgattgagtgaaaacaaagataatcgcttgaaggatattgtatct
actattcaatctgaacaaaatgatattattcgttcatctaaaaatacacctttagtcatt
caaggagtagcaggaagcggaaaaacaactgttgctcttcatcgacttgcatttctaatt
taccaataccgtgaaacattaagggcagataaaatgataatttttgcacctaataatatg
tttttagattatatttcaaacgttcttccagaattaggtgtaggtggcattcaacaaaca
acattttctgattgggcattaaataccctcgaccatgaagtcaaactaaaggattcatca
gaaaacctaaataaatggtttgcaactggtgctaaccggcttgaaatcaatcgttttagt
ccaggtaaatggaaaggctcaactcattttatgtcatatattgatcgatgtatggatatg
tatgaagcctcagctgttcctgaaaaagatttcaaaccttggaaaaacagaaagattgat
aaagaaacccttaaacattggtttagtattgaatataaacattatccacttgccaaacgg
agagaacgcattgttgcaaggctcaagaaatggattgataatgagctaaaggtgatagaa
gaaacaaatataagaaaagagaaaaagaaaaaagctactcaatatttgaattcttatatg
aaacaatggccaaagcatactgcactttctttctataaatctctattcacaacaacaaag
gatgcttcttttgtagacgaaataccagcagatattattaaatttacatctttaaattgt
aaaaagaaagagatggatcaggaggatttggctccgctagtctatattcacaatcgtctt
tttggaattgagtcaaagcaaaagttccatcatgtaatagtagacgaagctcaagatttt
tcacctttccaaattgcattattaaataagatgacgcttggaaattcgttcaccattctc
ggcgatttatcccaagccattcacgagtatcaagggattaatacttgggatgaattttta
gagatatttaataaaaaagaagtaacctattacgagttaaatagaagctatcgttctaca
atggaaattattcattttgcgaatgagattataaaaaaagcaaatatacctgttagctta
gcaaatccagtatttagaagtggagaacaagttaaaatacaagaagtagatcatacaaat
cgaattcaagtaatcattaattccattcaccaattaaaaaaggacaaaatggatacaatt
gcaattattggccgtactgaggatgagtgtgcaattttacatagtgaattatttgcagct
ggagaagaagtatcttttattcattcaaaagagagaaaatatgaaggtggaatttcagta
gtaccggtgtatctttctaaaggacttgaatttgatgctgtactacttgttgatgtagat
gatgcgcattatgaggaaacgaaacaagatgcaaagttactttatgttggatgtactcga
gcacttcacaatttgatcgtattatataccggaaacaaatctccactgattggaaaatca
ccactttag
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