Gottfriedia acidiceleris: MY490_11920
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Entry
MY490_11920 CDS
T08082
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MY490_11920 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaj03019
]
MY490_11920 (recQ)
03400 DNA repair and recombination proteins [BR:
gaj03400
]
MY490_11920 (recQ)
Enzymes [BR:
gaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY490_11920 (recQ)
Messenger RNA biogenesis [BR:
gaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MY490_11920 (recQ)
DNA repair and recombination proteins [BR:
gaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MY490_11920 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HTH_40
Helicase_C
RQC
HRDC
RecQ_Zn_bind
Helicase_Sgs1
Sigma70_r4_2
NMT1_3
DUF5805
Motif
Other DBs
NCBI-ProteinID:
UPM52548
LinkDB
All DBs
Position
complement(2495185..2497296)
Genome browser
AA seq
703 aa
AA seq
DB search
MLTLARENLKKYFGYENFRVGQEQIIERVLSGKHTAGIMPTGGGKSICYQIPATILQGVT
LVISPLISLMKDQVDALHQVGIPSTFINSSLSYNEVNERMMDLSYGEYKILYVAPERLES
ESFINELKRLPILLVAVDEAHCISSWGHDFRPSYLRIKNLIQELPTNPTILALTATATPQ
VKSDICNQLGIIEETTIITGFERENLSFKVIRGQNRLDYICNYIKQNKNESGIIYAATRK
EVDNVTNKLKNLGISVGKYHAGLSDAERSKQQDAFLQDNINVMVATNAFGMGIDKSNVRY
VIHYQMPKNMESYYQEAGRAGRDGLESECILLFTAQDVQIQRFLIEQSTFEHNRLKQEIS
KLQSMKDYSYCETCLQAFILKYFGDETDHSCGKCSNCIDQRTSIDITIDAQIVLSCIIRM
GERFGKTMVASVLTGSMNKKLIDLNFHTLTTYGLFKTRTLKSVGDLIDYLTSEQFIGVTS
GKFPLLTVTNRGREVLLNKINVMKKEEIQVSEITNVDNDLFDQLRSLRKEIATELGVPPF
VVFADSTLRDLCKLLPTTDEEFLQAKGVGLQKQQKFGKQFIEVIKKYKEENHIEVETKKT
KAITINKVPSHKISYESYQNGLHISEIAKERGLNTTTVENHILQSAMEDDHFDWDEVVPN
DIEKQIKDVINTVGSEKLRPIKDELPSEISYFMIKAVIMKSTI
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgttaacacttgcaagagaaaatttaaaaaagtattttggatatgaaaattttagagtt
ggacaagaacaaattattgaacgagttttatcaggaaagcacactgctggtattatgcct
acaggtggtggaaagtcgatctgttatcaaattccagcgacaattctccaaggagttacc
ctcgtcatttctcctttaatctctttaatgaaagaccaggtagatgcattgcatcaagta
ggtattccttccacatttattaatagttcactttcttataatgaagtaaatgaaagaatg
atggatttaagttatggtgaatataaaattctatatgttgcacctgaacgattagaatca
gaaagctttatcaacgaattaaaaagattgccaatcttacttgtagcagtagatgaagca
cactgtatatcgtcatggggacatgattttagaccaagttacttacgcataaaaaattta
atacaagaattgcctacgaacccaacaatactggcacttactgcaacggcaactcctcaa
gttaaatctgatatttgtaatcaacttggaataattgaggaaacgacaatcattacaggc
tttgaacgagagaatttgtcatttaaagtcattagaggacaaaatcgattagattatatt
tgtaattacataaaacaaaataaaaacgaatcaggtattatttacgctgcaactagaaaa
gaagtagataatgttacaaataaattaaaaaatcttggtatctctgtcggtaaatatcat
gcaggcttaagcgatgcagaacgttcaaaacaacaggatgcatttttacaagataatatt
aatgtaatggtcgctacgaatgcatttgggatgggaattgacaaaagtaatgttagatac
gtaatccattatcaaatgcctaaaaatatggaaagctattaccaagaggctggaagagca
ggacgagatggattagaaagtgaatgtattttactttttactgcacaagatgttcaaata
caaagatttttaattgaacaatctacttttgaacataatcgtctaaaacaagaaatttca
aaactacaatcaatgaaggattacagttattgcgaaacatgtttacaggcatttatttta
aaatactttggagatgaaactgaccactcctgtggtaaatgtagtaattgtattgatcaa
agaacttcaatagacattacaattgatgctcaaatcgttctatcatgcattattcgaatg
ggcgaaagatttggtaaaacgatggttgcgtcagttctaacaggatcaatgaataaaaaa
ttaatagacttaaattttcatactttaacgacatacggtttatttaaaacacgtacatta
aaaagtgtcggtgacttaattgattatttaacatcggaacaatttattggtgtaacaagt
ggtaaattcccattgttaactgtaacaaataggggaagagaagtactattaaataaaata
aacgtaatgaaaaaagaagaaatccaagtttctgaaattacaaacgttgataatgattta
tttgatcaattacgaagtttacgtaaagaaattgctacggaacttggagtaccacctttt
gtcgtatttgcagatagtactttacgagatttatgtaaattacttcctactactgatgaa
gaattcctacaagcaaaaggtgtcggattgcaaaaacaacaaaaatttggaaaacaattt
atagaagtaatcaagaagtataaagaagaaaatcatattgaagtagagacaaaaaaaaca
aaagcaataactattaacaaagtaccttcacacaaaatatcatacgaatcttatcaaaac
ggacttcatatttctgaaattgcgaaagagagaggattaaatacgactacagttgaaaat
catattctgcaaagtgcaatggaagatgatcattttgactgggatgaagtagttcctaat
gatattgaaaaacaaattaaagatgtaattaatacagttggaagcgaaaaacttcgacct
attaaagatgaattaccttctgaaattagttattttatgattaaagcggtaattatgaaa
tctacaatataa
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