Gottfriedia acidiceleris: MY490_14475
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Entry
MY490_14475 CDS
T08082
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MY490_14475 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaj03019
]
MY490_14475 (pnp)
03016 Transfer RNA biogenesis [BR:
gaj03016
]
MY490_14475 (pnp)
Enzymes [BR:
gaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MY490_14475 (pnp)
Messenger RNA biogenesis [BR:
gaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MY490_14475 (pnp)
Transfer RNA biogenesis [BR:
gaj03016
]
Prokaryotic type
tRNA degradation factors
MY490_14475 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
KH_2
S1_RRP5
S1_2
Motif
Other DBs
NCBI-ProteinID:
UPM53019
UniProt:
A0ABY4JIU4
LinkDB
All DBs
Position
complement(3047630..3049744)
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AA seq
704 aa
AA seq
DB search
MEQQKHVFSTELAGKTLTVEVGQLAKQANGAVLVRYEDTVVLATATASKEPKKVSFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVISMVMSV
DQDCSSEMAAMFGSSLALCVSDIPFNGPIAGVVVGRINGEFMINPTVEQAENSDIHLTVA
GTKDAINMVEAGANEVPEEVMLEAIMFGHQEIKKLIAFQEEIVAQIGKEKMEIQLHELDA
ELEKQIREICETELNAAIQVHEKHAREAAINEVKERVVLQFEENEADEETIGQVKEIFSM
LVKEEVRRLITVEKVRPDGRKLDEIRPLSSQVGLLPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGIEESKRFMHHYNFPQFSVGETGPIRGPGRREIGHGALGERALEPSIPDQK
DFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLIKSGEHYSVLT
DIQGMEDHLGDMDFKVAGTAKGVTALQMDIKIEGLSEQILKEALDQAKIGRMQILDSMLA
TISEPRTALSEFAPKILMMTINPDKIKDVIGPGGKQINKIIEETGVKIDIEQDGTVFISS
VDQPMNERAKQIIEDLVREVEVGQLYMGKVKRIEKFGAFVEIFAGKDGLVHISELAEERI
AKVEDVVSLGDEILVKVTEIDKQGRVNLSRKAVLKEQKEKAEQN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacaaaagcacgttttttccacggagcttgctggtaaaactcttactgttgaa
gtaggacaattagcaaagcaagcaaatggagcagttttagtaagatacgaggatactgtc
gtattagcaacagcaactgcatcaaaagagcctaagaaagttagctttttcccattaaca
gtaaactacgaagagcgtttatatgcagtaggaaaaattcctggtggatttattaaacgt
gaaggtagaccaagtgaaaaagcaatattagcgagtcgactaattgaccgcccaattcga
ccattatttgcagatggattccgtaatgaagtacaagtaattagcatggtaatgagtgtt
gatcaagattgttcatcagaaatggctgccatgtttggtagttcactagcgctatgcgta
tctgacatcccttttaacggaccgattgctggagttgtagttggtcgcattaatggcgaa
tttatgattaatccaactgttgagcaagctgaaaacagtgacatacatttaacagttgct
ggaactaaggatgcaataaacatggttgaagctggagctaatgaagtgccagaagaagta
atgcttgaagcaattatgtttggtcatcaagaaattaaaaaattaattgcattccaagaa
gaaatagtagctcaaattggaaaagaaaaaatggaaattcagcttcatgaacttgatgct
gaattagaaaaacaaattcgtgaaatttgtgaaacagaattaaatgcagcaattcaagtt
catgaaaaacatgctcgtgaagctgcaattaatgaagtaaaagaacgtgttgttcttcag
tttgaagaaaatgaagcagacgaagagactattggacaagttaaagaaatcttttcaatg
ctagtaaaagaagaagtgcgtcgtttaatcacggttgagaaagttcgtcctgatggaaga
aaattagatgaaatccgtccattatcatcacaagttggtttactacctcgtacacatggt
tctggtttattcactcgtggacaaactcaagcgttaagcatttgtacactaggagctcta
ggtgatgtgcaaattctcgacggattaggcattgaagaatcaaaacgttttatgcatcat
tataatttcccacaatttagtgttggtgaaacaggaccaattcgtggaccaggtcgccgt
gaaattggacatggagcattaggtgaaagagcacttgagccaagtattccagatcaaaag
gattttccatatacaatccgacttgtatcagaagtacttgaatcaaatggttcaacttca
caagcaagtatttgtgcaagtactctagcaatgatggatgctggtgtaccaatcaaagca
ccagttgctggtattgcaatgggattaattaaatctggtgaacattattcagttcttaca
gacattcaaggtatggaagatcatttaggagatatggactttaaagtagcaggaacagct
aaaggtgtaactgcacttcaaatggacattaaaatcgaaggattatcagaacaaatttta
aaagaagcattagatcaagcaaaaattggtcgtatgcaaattcttgattctatgcttgct
acaataagcgaaccaagaacggcattatctgagtttgctccaaaaatcttaatgatgaca
attaacccagataaaattaaagatgttattggacctggtggaaaacaaatcaataaaatt
attgaagaaactggcgtgaaaattgacatcgaacaagatggaacagtatttatttcatct
gtagaccaacctatgaatgaacgtgcaaaacaaattatcgaagaccttgttcgtgaagta
gaagtaggtcaattatacatgggtaaagtaaaacgaattgaaaaattcggcgcattcgtt
gaaatctttgcaggtaaagatggattagtccatatttctgaacttgcagaagaacgcatt
gcaaaagttgaggacgtagtttcacttggagacgaaatcctagtaaaagtaactgaaatc
gacaaacaaggacgagtaaatttatctcgcaaagctgtattaaaagaacaaaaagaaaaa
gctgagcaaaactag
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