Gottfriedia acidiceleris: MY490_17710
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Entry
MY490_17710 CDS
T08082
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MY490_17710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaj03000
]
MY490_17710
Transcription factors [BR:
gaj03000
]
Prokaryotic type
Helix-turn-helix
Other families
MY490_17710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_2
TPR_12
TPR_1
TPR_7
CFAP70_TPR_C
TPR_8
TPR_6
HTH_31
TPR_10
TPR_SusR
HTH_19
TPR_16
ANAPC3
Motif
Other DBs
NCBI-ProteinID:
UPM53605
UniProt:
A0ABY4JKN9
LinkDB
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Position
complement(3739650..3740900)
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AA seq
416 aa
AA seq
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MDYGMMIFHHRKKLGWTQEKLCEGICSVSHLSKIENGTKEAGIETIELLLKKMRVEIDEN
DSIDEVTGQLKRLWNSIERADYDSSKMLFDELIGKEESINFTNISNDFCITIWRYYIFIE
DLKMAKKKWKQLEAKKKKFSQYETIKYLFTLSIYYIKEKRYNDSLLVMDEVQEITPNLEI
DFQEYCFYRALVYSFINQTSLSMYFCNKSIPIFLQNNNIKRILDAKMLLSLQLIKSKFLD
RAEQFLIEILDSSVILSDKTIHMSALHNLGYLYYHSNQHKKAIKYYQEYLSNIQEGTEEY
FLVISNIANNMMIINDYETATELLCKNLSKIKDKNSASYIRMKVLLLEAKKDEANLVTYL
REVGLPLWVQTNDHEKLIKYYDVVTDYYEKHESLEKQNMLYKEYNSTLLKIIESRK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggattatggcatgatgatctttcatcatcgaaaaaaattagggtggacccaggagaaa
ttatgtgaaggaatatgctctgtttcgcatttaagtaaaattgaaaacggtacaaaagag
gccggtatagaaacgattgaattgcttttaaaaaagatgcgagttgaaatagatgaaaat
gatagtatcgatgaagtgactggtcaacttaaacgattatggaattcaatcgaacgagct
gactatgattctagtaaaatgctgtttgatgaattgattggtaaagaggaaagtataaat
tttactaatatatcaaatgatttttgtattacaatatggagatattatatttttattgaa
gatcttaaaatggcgaagaaaaaatggaaacaacttgaggcaaaaaagaagaaattttcc
caatatgaaacgataaaatatttgtttacactatcaatatattacataaaagaaaaaaga
tataatgactcacttctagtaatggatgaagtacaagaaattacgccaaacctcgagata
gatttccaggaatattgcttctatagagctttagtttatagctttattaatcagacatcc
ttatcgatgtatttttgtaataaatcaattcctatttttctacaaaataataatattaaa
cgaatccttgatgcaaaaatgttactttcacttcaattaattaagagcaagtttttagat
cgagccgagcaattcctaattgaaatactagattcttctgtcatattaagtgataaaaca
atacatatgagtgctttacataatttaggctatttatactatcattctaatcaacataaa
aaagcaataaagtattatcaagagtatttatctaatatacaggaggggactgaagagtat
tttttagtcatttcaaatatagcgaataatatgatgatcataaatgattacgagacggct
actgagttgttatgtaagaatctctcaaaaataaaggataaaaatagtgcatcctatatt
cggatgaaggttttattactagaggcaaaaaaggacgaagcaaatctagttacatattta
cgtgaagttggcttgccattatgggttcaaaccaatgatcatgaaaaattaatcaaatat
tatgatgttgtgacagattactatgaaaaacacgaatcgttagaaaaacaaaacatgtta
tataaagaatacaatagcactctattaaaaattatcgaaagtaggaaataa
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