Gottfriedia acidiceleris: MY490_18440
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Entry
MY490_18440 CDS
T08082
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MY490_18440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaj03000
]
MY490_18440
Transcription factors [BR:
gaj03000
]
Prokaryotic type
Helix-turn-helix
Other families
MY490_18440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_1
TPR_12
HTH_31
TPR_2
TPR_10
CEP162_C
Motif
Other DBs
NCBI-ProteinID:
UPM53736
UniProt:
A0ABY4JJE9
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All DBs
Position
complement(3895764..3897023)
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AA seq
419 aa
AA seq
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MIEGEIIKFYREKMGLTQAMLGEGICTTTHVSKIERGKTAYSPDIIALFSDRLGININQE
VQSFYNLEKKLHLWHDALIMKKEVQIEEYKAELEQMPFIDYSQYAAHYNLLRARYYFHNQ
NLDMVKQILTYVKKEYSDLSPFEKNLFYHLQGMYYISNYTSLSNEDHQKAIKVLKMINID
EYRNEEYYHHLAIAYHFGSSKILAYKYAEMALKFFQKTNNYPSAISSETLMLLQYGSELE
INFSEVVERYKDLIHNCEVLGDRERKAILLNNLGVKYFKREEYETALYYFEESINETENK
KSINYLRRLCNYLETCTEGTLLEKEILLGVMKRALALAKMLKSPVHITLIKLYKLKAEGA
REKFYQYLSDEALPFFYSTNNKFYIEQFGKKLYKYYIEIKEYQKAAELYESIEHTFVSM
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgattgagggggaaatcataaagttttatcgtgaaaaaatggggttaactcaagcaatg
cttggagaaggtatatgtacaactactcatgtaagtaaaattgaaagaggtaagacggct
tactcacctgatattattgctttattctcagatcgtttagggatcaatattaatcaagaa
gtccaatctttttataatttagaaaaaaaattacatctatggcatgatgcattaatcatg
aaaaaagaagtacaaatagaagaatataaagcagaacttgaacaaatgccctttattgac
tattcacaatatgcagcccactataatttactaagagcaaggtactattttcataatcaa
aatttagatatggttaagcaaatacttacatatgtgaaaaaagaatatagtgatttatct
cctttcgagaaaaatttattctatcatcttcaaggtatgtactatatatcgaactatact
agcctaagtaatgaggaccatcaaaaggcaattaaggtattaaagatgattaatattgat
gaatatcgaaatgaagaatattatcaccatctagcaattgcctatcattttggaagttca
aaaatcttagcgtataaatatgccgaaatggcacttaagttttttcagaagacgaacaac
tacccatctgcaattagttccgaaacccttatgcttttgcagtacggtagtgaactagag
atcaattttagtgaagtagttgaacgctataaagatttgattcataactgtgaagtatta
ggagaccgcgaacgcaaggccattttattgaataatctcggagtgaaatattttaagcga
gaagagtatgaaactgcattgtattattttgaggaaagtattaatgaaaccgaaaataaa
aaatcaatcaattacttaagacgtttgtgcaattatttagagacatgtacggaaggcaca
ctattagaaaaagagatacttcttggtgtgatgaaaagagcattagcattagcaaaaatg
ttaaaaagcccagtacatattacattgattaaattatataagcttaaggctgagggagcc
cgtgaaaaattttatcaatatctatcggatgaggcactcccattcttttattctactaat
aataaattttatatcgaacagtttggtaagaaattatataaatactatatagagattaaa
gagtaccaaaaagctgccgagttatatgagtccattgaacatacatttgtaagcatgtaa
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