Gottfriedia acidiceleris: MY490_18865
Help
Entry
MY490_18865 CDS
T08082
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MY490_18865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaj03000
]
MY490_18865
Transcription factors [BR:
gaj03000
]
Prokaryotic type
Helix-turn-helix
Other families
MY490_18865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
TPR_1
TPR_2
TPR_10
Phage_T4_Y04OP
TPR_INTS8_3
TPR_12
TPR_BSK1_C
Motif
Other DBs
NCBI-ProteinID:
UPM53815
UniProt:
A0ABY4JL73
LinkDB
All DBs
Position
complement(3992705..3993940)
Genome browser
AA seq
411 aa
AA seq
DB search
MVVGKIIKFYREKRGFSQEMLCEGICSKSYLSKFENGKVILSPDIIASFSERLGIDLNEK
QESYHLIEKKLNDLNLAIIKQKSQCIDDIYNQLKNIPFILSTKYAYQYLLLLARFYLYKK
MFKKAKKTIGKIEKEYEHLSEYEKNFLLHVKGIYYISIYRISVCDDMRNAVRVLNQINDT
YRNEEYFYHLALAYYFAGSKLLSYIYARKALNYFTKTHNYVQAINAQSLLLFQYDDEQDV
DFDELINKYHSLISSCDSVGAQIQKGILLNNLGVKYFKRRDFEEASNCFEQSLHLTKNSK
IYYLRRYYNYVEACLEGSLLDKTELLELIDFGSKLAKKHQSSIHLTLFMLLKLSCESNKK
RYYKFLREVAVPQFKSTNNINYYEQYGKKLYEYYIQCKQFDKAIELELQFK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggtagtcgggaaaataattaagttttaccgtgagaaaagaggatttagtcaagaaatg
ctatgtgaaggaatttgctctaaatcatatttgagtaaatttgaaaatggaaaagttata
ctttctcctgatataatagcctcattttctgaacggttaggtatagatttgaatgaaaag
caagaatcctatcatttaattgaaaagaaattgaatgatttaaacttagccattataaag
caaaaatcccaatgtattgatgacatctataaccaacttaagaatataccttttattttg
tcaacaaaatatgcctatcaatatttattattgttggcaagattttatctttataagaag
atgtttaaaaaagctaaaaaaacaataggaaaaattgaaaaagaatatgaacatcttagt
gaatacgaaaagaattttcttttacatgtgaaaggaatctattacattagcatttataga
atttcagtatgtgatgatatgagaaatgctgtaagagtattgaatcaaattaatgataca
tatagaaatgaagagtatttttaccatcttgcactcgcatactattttgcaggatctaaa
ttattatcatatatttatgcaagaaaagctctaaattattttactaagacccataactac
gttcaggcaattaatgctcaatcactactgttatttcaatacgatgatgaacaggacgtt
gattttgatgagttaatcaataagtatcatagtttaattagtagttgcgatagcgtgggt
gcgcaaatacaaaaaggaattctacttaataatttaggtgttaaatattttaaaagaaga
gattttgaagaagcatctaactgttttgaacaatccttgcacttaacaaaaaatagcaaa
atttattatttgagacgttattataattatgtagaggcatgtttagaaggaagcttgctt
gataagactgaacttttagagttgattgattttggaagtaaactagcaaaaaagcaccaa
agttcaatccaccttacattatttatgctcttaaagctgagctgtgaaagcaataaaaaa
agatattataaatttttgagagaagtggcagttcctcaatttaaatcaacaaataatatt
aattattatgagcaatatggaaaaaaattatatgaatattatattcagtgcaagcagttt
gacaaggcgattgaattagaacttcaattcaagtga
DBGET
integrated database retrieval system
