Gottfriedia acidiceleris: MY490_19980
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Entry
MY490_19980 CDS
T08082
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MY490_19980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaj03000
]
MY490_19980
Transcription factors [BR:
gaj03000
]
Prokaryotic type
Helix-turn-helix
Other families
MY490_19980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_12
TPR_2
ANAPC3
TPR_10
TPR_1
TPR_3
HTH_19
ALKBH10B_N
SabA_adhesion
TPR_8
Motif
Other DBs
NCBI-ProteinID:
UPM53998
UniProt:
A0ABY4JJH8
LinkDB
All DBs
Position
4226339..4227559
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AA seq
406 aa
AA seq
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MYEGKIIKFYREKYKLTQEQLGKDICSVTHISKIECAQTKYAPEIVNLLSKRLGINMELE
VANFMNIKQRLLHWHDVIIMQLFEEMDQINYEFEMEELIQISEYHDMYQLLRAKYFLTHN
KINEAYKIIKKIQKKEAKLAQYESNLLKHILGIYYLAKQEYVKVIQILKSIDHTNYKNPE
YYYHLAVAYHTLKAPVLTYYYAEKSHQFFKQINNYLRVIDAEMLMIIQVQGETLDEEIII
RFKNLIRSCELCNSPDRKAKALHNLAYEYYRGKNYKEASNYYKQSMHLKDSECSSYLLSL
EGYIRSSFEDAACNLEELIQQAETGLSTAKKHSYTLYIHLFKLLLYFLKSKEKEYYHYLN
NRALPMFMKSGFSFLVERSKKELFNYYSKMDLNEQAMEIAQLIVNS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaggaaaaatcatcaagttttatagagaaaagtacaaactaacgcaagaacag
cttggaaaagatatttgctccgttacccatataagtaaaatagagtgtgcacagacaaag
tacgctcctgaaattgttaatttattatctaaaagactaggcattaatatggaattagaa
gtagctaattttatgaatatcaaacagcgtctacttcattggcacgatgtaatcatcatg
caattatttgaagagatggatcaaataaattatgaatttgaaatggaagaattaattcaa
atttcagagtaccacgacatgtatcagttactaagagctaaatattttctaactcataat
aagatcaatgaagcttataaaatcatcaaaaagattcaaaaaaaagaagccaagttagca
caatatgaaagcaacttattaaagcatattttaggaatttattatttagcaaaacaagaa
tatgttaaagtaatccaaattctaaagtccatcgatcatactaattataaaaaccctgaa
tattattaccatttagcagttgcttatcatacattaaaggcccctgtattaacctattat
tatgctgaaaaatctcatcaattttttaaacaaatcaataactatcttcgagtgattgac
gccgaaatgttaatgattattcaagtacaaggtgagactttggatgaagagattattatt
cggtttaaaaatttgattagaagctgtgagttatgtaattcacctgatcgaaaagcaaag
gctttgcataatttagcatatgaatattacagaggtaaaaattataaagaagctagtaat
tactataagcaatctatgcatcttaaagattcagaatgttcatcatatttgttatcttta
gaaggctatattcgaagttcttttgaagatgctgcatgtaacttggaagaactaattcaa
caagcagaaaccggcctttctacagcaaaaaagcatagttacactttatatatccattta
tttaagcttttactttatttcttaaagtcgaaagaaaaggaatactatcattatttaaac
aacagggcgttacctatgtttatgaaaagtggattttcatttttagtggagcgctctaag
aaggagttatttaactattattctaaaatggatttaaatgagcaggcaatggaaatagca
caattaatcgtaaattcttaa
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