KEGG   Gottfriedia acidiceleris: MY490_20235
Entry
MY490_20235       CDS       T08082                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
gaj  Gottfriedia acidiceleris
Pathway
gaj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gaj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MY490_20235 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gaj03400]
    MY490_20235 (uvrA)
DNA repair and recombination proteins [BR:gaj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MY490_20235 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MY490_20235 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 nSTAND1 AAA_29 AAA_21 nSTAND3 RsgA_GTPase AAA_22 DnaJ_CXXCXGXG ATPase_2 ATPase AAA_23 AAA_33 APS_kinase AAA_18 Viral_helicase1 NACHT cobW MeaB NB-ARC MMR_HSR1 BCA_ABC_TP_C IIGP Septin NTPase_1
Other DBs
NCBI-ProteinID: UPM56562
LinkDB
Position
complement(4290775..4293633)
AA seq 952 aa
MNEIIIKGARAHNLKNIDVTIPRNQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY
ARQFLGQMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARIGTPIC
PNHGIEISSQTVEQMVDRVMEYPERTKIQVLAPVVSGRKGTHVKVFEEIKKQGFVRVRVD
GELFDVSDDIELEKNKKHSIEVVIDRIVVKDGVASRLADSLETALKLGEGRVIIDVIGEE
ELLFSEHHACPLCGFSIGELEPRMFSFNSPFGACHSCDGLGTKLEVDINLVIPNDELTLK
ENAIAPWESISSMYYPQLLESVCNHYGIDMNIPFKDIPKDQQDKILYGSNGEQIYFKYDN
EQGHVREAMIEFEGVISNVERRFKETSSDFIREQMEKYMAQQHCPTCKGHRLRKEALAVF
IGGLHVGEVTKMSVKEAFDFFGSLDLTPKQEKIANLILREIRERLGFLVNVGLDYLTLNR
AAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLISTLLNMRDIGNTLI
VVEHDEDTMLAADYLIDIGPGAGIHGGQVISQGTPHEVMNDQNSLTGKYLSGEKFIPVPL
ERRKGDGREIKIVGAKENNLKNVSTSFPLGTFVAVTGVSGSGKSTLINEILYKSLAQKLN
GSKVRPGEHKEIKGIEQLEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVYAATNESKVR
GYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYKDKS
ISEVLDMTVEYAVSFFENIPKIKRKLQTLNDVGLGYITLGQPATTLSGGEAQRVKLASEL
HKRTNGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNGDTVLVIEHNLDVIKAADHLIDL
GPEGGDKGGTIVATGTPEKLCKVEASHTGKYLKAVLERDKARMEKRLALMET
NT seq 2859 nt   +upstreamnt  +downstreamnt
atgaatgaaataattattaaaggggccagagcgcataacttaaaaaatatcgatgtaacg
attcctcgtaatcaattagtagttgtgactggtctatcgggatcaggtaagtcatctcta
gcatttgatacgatttatgcagaaggtcaacgtagatatgtagaatcattatctgcgtat
gctcgtcagtttttaggtcaaatggataaaccggatgtagattcaatcgaaggactttca
ccagcgatttcaattgatcaaaaaacgactagtcgaaatcctcgttcgaccgttggaact
gtaacagagatctacgactatttgcgtcttctttatgctcgtatcggaactccaatttgt
ccaaatcatgggatcgaaatttcttctcaaacagtagaacaaatggttgatcgtgtaatg
gagtatcctgaacgaacaaaaattcaagtgcttgctccagtggtgtctggtcgtaaaggg
acacatgtaaaagtatttgaagaaattaaaaaacaagggttcgttcgcgttcgtgttgat
ggtgagttatttgatgtatctgatgatatagaattagagaaaaataagaaacattcaatc
gaagttgtaattgaccgtattgttgtaaaagatggtgtagcatctcgactagctgattct
cttgaaacagcattaaaactaggagaaggtcgagttatcattgatgtaataggtgaagag
gaattactatttagtgaacatcatgcatgtccactgtgtggtttctcaattggggaatta
gaaccgcgtatgttttcgtttaacagcccgtttggtgcttgtcattcatgtgatggatta
ggaacgaaattagaagtggatataaacttagtgatcccaaatgatgaattaactcttaaa
gaaaatgcgatcgcaccgtgggaatcaattagctcgatgtattatcctcaattactcgaa
agtgtatgtaatcattacggaattgatatgaatattccatttaaagacataccaaaagat
caacaagataaaattctttatggtagtaatggagaacaaatctattttaaatatgataac
gagcaaggtcacgtacgtgaagcaatgattgaatttgaaggtgttatttcaaatgtagaa
agacgttttaaggaaacatcttcagattttattcgtgagcaaatggaaaaatacatggct
caacaacattgtccaacttgtaaagggcatcgactaagaaaagaggcacttgctgtattt
attggtggcttgcatgttggagaagtaacaaaaatgtcggttaaagaagcgtttgatttc
tttggatcgcttgatctaacgccaaaacaagaaaaaattgcaaatctaatccttcgagaa
attagagagcgtttaggctttttagtaaatgtaggtttagattatttaacattgaaccga
gcagcaggtacattatctggtggggaagctcaaaggattcgtttagcgactcaaattggt
tcgagattaacaggtgtattatatattttggatgagccatcaattggattacaccaacgt
gataatgatcgtttaatctcaacattgttaaatatgagagacatcggaaatacattaatt
gttgtagaacatgatgaagatacgatgctagcagcagattatttaattgatatcggaccg
ggagctggtattcacggtggacaggtcatttcgcaaggaacgccacatgaagtaatgaat
gatcaaaattcattaacagggaagtacttatcgggtgagaagtttattcctgtaccgctt
gagcggaggaaaggcgatggacgtgaaattaaaattgttggcgcaaaagaaaacaattta
aaaaatgtatcaacttcattcccattaggtacgttcgttgcagtaacaggtgtatcagga
tcagggaaaagtacattaattaatgagattttatataaatcattagctcaaaaattaaat
gggtcgaaagtacgtccaggggagcataaagaaataaaagggattgaacaattggagaag
gttattgatattgatcaatcaccaattggtcgtactcctcgttcaaatccggctacttat
actggtgtatttgatgatattcgagatgtatatgccgctacgaatgagtcgaaagttcgc
ggttataagaaaggtcgttttagcttcaacgttaaaggcggtagatgtgaagcatgtcga
ggcgatggaatcattaaaatcgaaatgcatttcctacctgatgtttacgtaccatgtgag
gtttgtcatggtaaacgatataatcgagaaactttagaagttaagtataaagataaatcg
atctctgaagtattagatatgacagttgagtatgcagtttcattctttgaaaatattcct
aagattaaacgtaaacttcaaacgttaaatgatgtaggtttaggttatattacattaggt
caaccagctactactttatctggcggagaagcacaacgagtaaaactagcttccgagctt
cataaacggacgaatggaagaactttatatatattagatgaaccaactacagggcttcat
gttgatgatattgcccgattattagttgttttacaaagacttgtagataatggagatact
gtacttgtaattgaacataacttagatgtcattaaagcagccgaccatctaatcgattta
ggaccagaaggtggagacaaaggtggtacgatcgtagcaaccggtacaccagagaaacta
tgtaaagtcgaagcgtctcatacaggtaagtatttaaaagctgtattagaacgtgacaaa
gctagaatggaaaaaagattggcattgatggaaacttaa

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