Gottfriedia acidiceleris: MY490_20620
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Entry
MY490_20620 CDS
T08082
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MY490_20620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaj03000
]
MY490_20620
Transcription factors [BR:
gaj03000
]
Prokaryotic type
Helix-turn-helix
Other families
MY490_20620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
HTH_31
TPR_2
RapH_N
TPR_10
TPR_1
MqsA_antitoxin
HTH_19
Motif
Other DBs
NCBI-ProteinID:
UPM54115
UniProt:
A0ABY4JM06
LinkDB
All DBs
Position
4365992..4367239
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AA seq
415 aa
AA seq
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MLEGEIIKFYRKKAGLTQEELGKDICTATHVSRIERGETRYSEEIIQLFSQRLQIDIKNE
IAAVQNIEKKLQKWHNAIILERMKDVILIKEELESIHYISASNYAIYFQLLLARYFILCK
NIEKADRIIKRIEKDSPPMSTYEKNLFHHVRGIYYLTQYTRLENVNRQIALQELKKVNIE
EYGNKEYYYHLGSAYHWTQSKVMAYFYGEKAFRYFNKTNNYARAILAESLMLVQLKDSTQ
LDFEEIVVRYESLIEHSEALGLFDKRGMILHNLGLMYFWKQDFKNAHIFYKKSVEEADKQ
SLLYLNRLYNYLDNAEEGKLLTKNELLNEANEGLALSEKAANDLYIILFTLLILRFNEKF
DEYYDYMEQIAFPFFKSHHHVTHAIKYAKLLYNYYVKTKQYEKAVHTGDMFINGH
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaggcgagatcattaaattttatcgaaaaaaagcgggattgacccaagaggaa
ttaggaaaagacatttgtaccgctacccatgtaagtagaattgaaagaggggaaactcga
tattctgaagaaattatacaattgttctctcaacgtcttcagattgacattaaaaatgag
atagccgctgttcaaaatatcgaaaagaaacttcaaaaatggcataatgcaatcatatta
gagcgaatgaaggatgtcatactaattaaagaagaactagaaagcattcactatataagt
gcgtctaactatgctatctatttccagcttttattagccagatattttattttatgcaaa
aacattgaaaaagcagatcgtattattaaacggattgaaaaagattctcctcctatgtcg
acttatgaaaagaacttatttcatcatgtaagaggaatatattatttaactcaatataca
cgactagaaaatgtaaacaggcaaattgcactacaagaattaaagaaggtcaatatagag
gaatatggaaataaggaatattattatcatcttgggtcagcctatcattggactcagtct
aaagttatggcatatttctacggtgagaaggcatttagatattttaataaaacaaataat
tacgcaagagcaattttggcagaatccttaatgttagtgcaattaaaagacagtacacaa
ctagattttgaagaaattgtagtaaggtatgaaagtttaattgagcatagcgaggcttta
ggtctttttgataaaagaggaatgatcttacataatttaggtctaatgtatttttggaaa
caagactttaaaaatgcacatatcttttataaaaaatccgttgaagaagctgataaacaa
tccttactttatttaaatcgtttgtataactatttagataatgcagaagaagggaagctt
ttaacaaagaatgaattgctaaatgaagcaaatgaaggacttgccctttcagaaaaggca
gcgaatgatttatatattattctctttactcttctaattttacgttttaatgaaaaattt
gatgaatattacgattacatggaacaaattgcatttcctttctttaagagtcaccatcat
gtcacacatgcaataaagtatgcaaaactgctttacaactactatgttaaaactaaacaa
tatgaaaaagctgttcatactggggatatgtttattaatggccattag
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