Gottfriedia acidiceleris: MY490_21775
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Entry
MY490_21775 CDS
T08082
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj03420
Nucleotide excision repair
gaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MY490_21775
03430 Mismatch repair
MY490_21775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaj03400
]
MY490_21775
Enzymes [BR:
gaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY490_21775
DNA repair and recombination proteins [BR:
gaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MY490_21775
MMR (mismatch excision repair)
Other MMR factors
MY490_21775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PhoH
UvrD_C_2
AAA_19
AAA_22
AAA_30
DEAD
SLFN-g3_helicase
CTLH
NACHT
DUF3006
AAA_11
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UPM54332
LinkDB
All DBs
Position
complement(4626433..4628784)
Genome browser
AA seq
783 aa
AA seq
DB search
MNNELQKEQVRVNAVLDLITDKISKLTEETAQRRNEVINVRKNFWDEVKVNTDSFDDYLE
TVISLRQQSQLLAIGQINHKQSSNRLSALRRMKEVPYFGRINFTEEGMSETERIYIGVST
LMDETGENILVYDWRAPVSSVYYDYPPGPAEYDTPGGKVNGVLDQKWQYIIRNGVIESMF
DTSLTIGDEILQHVLGKGTNKHMRSIVASIQKEQNQIIRYDKGRLLIVQGAAGSGKTSAA
LQRIAYLLYKYRNWIKADQIILFSPNAMFNNYVSRVLPELGEENMQQVTFQEYLVHRLSD
AFQVEDNYEQLEYVLTAIDDPSYKTRTSSIRFKASTHFFETIKAYRQSLELSGMVFRGFK
FRGKPVVTAKQIYERFYSTDTSLKFNNRLEKLTEWLNKQINELEKLELKKTWVQDEIELL
SKDDYQKAYKYLQKKQSKEDSFDDYEQQTKVLGRMVVRKKLKPLREWVRGLRFIDIKSVY
KQLFSNPTQIEQWIEGNTPENWEDICQLTLNMLDEGKLFYEDATPYLLLKELVQGFQSNV
TIKFVLVDEAQDYSPFQFEFLKRLFPSAKMTVLGDFNQAIFAHASEMGDFNVLKGLYGSD
ETKVINLTRSYRSTKPIVEFTRRLIPGGDLITPFERVGDKPVLTQISNREDLHSHIATKI
EDLKKGEFNTIAVICKSAEESLEAYEALKNVEGIKLVKRNSVEYEQGVVIIPAYLAKGIE
FDAVIIYDASAQVYGDERLRRLFYTACTRAMHQLHLYSLGEATPFLHNINSEFLLLNQTI
AHD
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgaacttcaaaaagaacaagtaagagtaaatgctgtactagatctaattacg
gacaaaattagtaaactaacagaagaaacagcccaacgcagaaacgaagtcatcaatgtt
cgtaaaaacttttgggatgaggttaaagttaatacggatagctttgatgactatttagag
acggttattagtttaagacaacaatctcaacttttggcgatcggacaaattaatcataag
caatcttcaaaccgattatcagcacttcgtcggatgaaagaagttccttattttggtcgc
attaattttacagaagaaggtatgtctgaaacggagcgtatttatattggcgtttcaact
ctaatggatgaaactggagagaatattttagtttatgattggagggccccagtttcgagt
gtttactatgattatccaccaggccctgctgagtatgatacacctgggggaaaagtaaat
ggagtattagaccaaaaatggcaatacattatacgtaacggtgtaattgaatcaatgttc
gatacaagtctcactataggtgatgagattttgcagcatgtgctaggtaaaggtacaaac
aagcatatgagaagcatagtagccagcattcaaaaggaacaaaatcagattattcgttat
gacaaaggtagattactgattgttcaaggggcggccggtagcggaaagacatcggcagct
ttacaaaggattgcctatttgctctacaaatatagaaattggataaaagcagatcaaatt
atcttattttctcctaatgcaatgtttaataactacgtatcgagagttttacctgaacta
ggcgaagaaaatatgcagcaagttacattccaagagtatttagttcataggctaagtgat
gcgtttcaagttgaagataattatgagcaattagaatatgtgctaactgctatagatgat
ccttcctataagactagaacttcaagcattcgatttaaagcttcaactcatttctttgaa
acgattaaggcatacagacaatcattggaattatcgggaatggtctttcggggatttaaa
tttagaggcaaaccagtcgttacagctaaacaaatatatgaaagattttatagcaccgac
acttctttaaaatttaataatcgattagagaagttgacggaatggttaaacaaacaaatc
aatgaattggaaaagctagaattgaaaaaaacctgggtacaagacgaaatcgagttactc
agcaaagatgattatcaaaaagcatataagtacctacagaaaaaacaatctaaagaggac
tcattcgatgactacgaacaacaaactaaagtattaggtcgaatggtcgttcgtaaaaaa
ctaaagccactacgtgaatgggttcgaggattacgtttcattgacataaagagtgtatat
aaacagttattttccaatccaactcaaattgaacaatggattgaagggaatacacctgag
aattgggaggacatatgtcagttaacattaaatatgttagatgaaggcaaattgttttat
gaggatgctacaccgtatttacttttaaaagaattggttcaaggattccaatcaaatgtt
accattaaatttgtacttgtagatgaagctcaagattattctcctttccaatttgagttt
ttgaagagattgtttccttctgcaaagatgaccgttctaggtgactttaatcaggcgatc
tttgcgcatgccagtgaaatgggagattttaatgtccttaaaggcttatatgggtcagat
gaaacaaaagtaatcaatctaacacgcagttacagatcaacaaaaccaattgtagagttc
acacgtaggctcatacctggaggcgatctaattacgccttttgaacgagttggagataag
cctgtgttaacgcagatatctaatcgagaagatttgcatagtcatattgcaactaaaatt
gaagacttaaagaaaggtgaatttaatacaattgctgtcatttgcaaatctgcagaagaa
agtttagaggcatatgaagctttaaagaatgtagaaggaatcaagctcgtgaagagaaac
tcagttgaatatgaacaaggtgtagtcattattcctgcatatttggcaaaaggaattgaa
ttcgatgcagtaattatttatgatgcatcagctcaagtttatggagatgagcgtttacgg
agactattctatactgcttgtacaagagcaatgcatcagttgcatttatatagcttaggc
gaagcgactccttttttgcataatataaattcagagtttctactattaaatcagacgatc
gctcacgattaa
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integrated database retrieval system
