Glycocaulis alkaliphilus: X907_0044
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Entry
X907_0044 CDS
T05786
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
gak
Glycocaulis alkaliphilus
Brite
KEGG Orthology (KO) [BR:
gak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gak03021
]
X907_0044
Transcription machinery [BR:
gak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
X907_0044
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
KORA
UCR_14kD
HTH_11
Sigma70_r4_2
HTH_10
HTH_3
GNT-I
Motif
Other DBs
NCBI-ProteinID:
AZU02595
UniProt:
A0A3T0E5E8
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All DBs
Position
39977..40906
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AA seq
309 aa
AA seq
DB search
MKSDAALAGVASMSTQPSARRSADPDRQFMKTAMAVPLLEREEELALATAWREEGDEQAL
HKLTTAYMRLVIAVAARFRQYGLPFADLVQEGNIGLMQAAARFEPERGLRFSTYASWWIR
SSIQDYVLRNWSIVRTGTTAAQKSLFFNLRRLRALISDVSGGALTPENRAYVAEALKVGE
DDVDAMAARLAAVDRSLNAPFTEEGEGEWQDLLADDRPDPEAAVMDARDTATRQNWISEA
MSRLSERERHIITQRRLTEESVTLEKLGEELGISKERVRQIEHQALMKLKKSLTEIVGDP
EEAGLVPAG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatccgatgccgcccttgccggagtagcgtccatgtccacccagccttctgcccgc
cgcagtgccgatcctgaccgccagttcatgaaaacggccatggccgtaccgctgctggag
cgcgaggaagaactggcgctggcaacagcctggcgcgaggagggtgatgagcaggccctg
cacaagctcaccacggcctatatgcgcctcgtcatcgcggtggcggcacgtttccgccag
tacggcctgcccttcgctgatctggtgcaggagggcaatatcggcctgatgcaggcggca
gcccggttcgagccggagcggggcttgcgcttttccacctatgccagctggtggatacgc
tcttcgatccaggattatgtgctgcgcaactggtcgatcgtgcgcaccggcaccacggcc
gcccagaaatcgctgtttttcaatctgcgccgcctgcgcgccctgatcagcgatgtgagc
gggggcgcactgacgccggaaaaccgtgcctatgtcgccgaagcgctcaaagtcggtgaa
gacgatgtggacgcgatggccgcacgcctggccgccgttgaccgctcgctgaacgcgccc
ttcaccgaagagggtgaaggcgagtggcaggatctgctcgctgatgaccgccctgaccct
gaagcggctgtgatggatgcgcgcgacacggccacgcgccagaactggatcagcgaggcc
atgagccgcctgagcgagcgcgagcgtcacatcatcacgcagcgccgccttaccgaagaa
tccgtcacgctggaaaagctcggcgaggagctgggtatctccaaggagagggtgcgccag
atcgaacatcaggcgctgatgaagctgaaaaaatccctgaccgaaattgtcggcgatcct
gaagaggccggactggttccggcagggtag
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