Glycocaulis alkaliphilus: X907_0143
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Entry
X907_0143 CDS
T05786
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gak
Glycocaulis alkaliphilus
Pathway
gak03030
DNA replication
gak03410
Base excision repair
gak03420
Nucleotide excision repair
gak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X907_0143
03410 Base excision repair
X907_0143
03420 Nucleotide excision repair
X907_0143
03440 Homologous recombination
X907_0143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gak03032
]
X907_0143
03400 DNA repair and recombination proteins [BR:
gak03400
]
X907_0143
Enzymes [BR:
gak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X907_0143
DNA replication proteins [BR:
gak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
X907_0143
DNA repair and recombination proteins [BR:
gak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
X907_0143
NER (nucleotide excision repair)
GGR (global genome repair) factors
X907_0143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AZU02693
UniProt:
A0A3T0E5U2
LinkDB
All DBs
Position
complement(138009..140783)
Genome browser
AA seq
924 aa
AA seq
DB search
MATTRPVTKDSHVYLVDGSGYIFRAYHALPPLTRSDGTPVGAVQGFCNMLWKLLEDLKGE
DQPTHLAVIFDHSAKTFRNDLYPEYKAHRPEPPEDLRPQFAIIRDATKAFDLPSIEMDGF
EADDLIATYARQAAEKGARVTIASSDKDLMQLVNDQVTLLDPMKVRRIGDAEVREKFGVG
PERVIDVQALAGDSVDNVPGVPGIGIKTAAELINTYGDLETLLARAEEIKQPARRTKLIE
NAENARISKLLVTLKDDIETPDPLEGFGAADPDGEKLIAFLRSMEFRTITRRVEEALGAG
PADETGDATAPVDRSGYQCVQTAEALQDWIARAKRMRVIAVDTETDALSATAAGLVGISI
AVKPGEACYIPLAHLGGDLADGGGRPQQIEMAQAIGLLKPLLEDRAVLKVGQNIKYDLAV
LARQGINMAPVDDTMLISYVQEAGLHGHGMDELSELHLGHKPVAFKEVAGTGKNQKSFGE
IDLKRATEYAAEDADITLRLYELLKPGLAGKGLATVYETLERPMPAVLARMELNGIKVDV
AQLSRLSSEFAQRMAQAEEEAFEAAGTRFNLGSPKQIGDIIFGDMGLPGGKKTKTGAWST
DASVLEELANDGHALPRALLTWRQFAKLKSTYSDALKAAINPDTGRVHTSFSLAATTTGR
LSSSDPNLQNIPIRTEEGRLIREAFVAEKGHVLVAADYSQIELRLLAHIAGVDALKDAFK
AGHDIHAMTASEMFGVPLDQMDPMTRRKAKAINFGIIYGISAFGLANNLGIKRDEAKAYI
EAYFEKFPGIAAYMDAMKETAREKGYIETVFGRRCHFPGIRDKNPQMRQFAERQAINAPI
QGSAADIIRRAMARMDAAIEEAGLKARMLLQVHDELVFECPEDEAGALIPLVQDVMGKAA
LPAVDLSVPLVVEAKAALTWGQAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggccacgacacgccccgttaccaaggactcccatgtctatctggtggacgggtcgggc
tatatcttccgcgcctatcacgccctgccgccgctgacgcgctctgacggcacgccggtc
ggcgcggtgcagggtttctgcaacatgctgtggaagctgctggaggacctcaagggcgag
gatcagccgacgcatctggccgtgattttcgatcattcggccaagaccttccgcaatgat
ctttatcctgaatacaaggcccaccgccccgaaccgcccgaggatctgcgcccgcagttc
gcgatcatccgcgatgccaccaaggcgtttgacctgccctcaatcgagatggacgggttt
gaggccgacgacctgattgccacctatgcccgccaggccgccgaaaagggcgcgcgcgtc
accatcgcgtcgtcggacaaggatctgatgcagctggtcaatgaccaggtgacgctgctg
gacccgatgaaggtgcgccggattggcgatgccgaagtgcgcgagaagttcggcgttggt
ccggagcgggtgatcgacgtgcaggcgctcgctggcgacagcgtggacaatgtgccgggc
gtgccgggcatcggcatcaagacggcggctgaactcatcaacacgtatggtgatcttgaa
acccttcttgcaagggcagaggagatcaagcagcccgcacggcgcaccaagctgatcgag
aatgcggagaatgcgcgcatctccaagctgctggttacgctgaaagacgacatcgaaacg
cctgatccactggagggtttcggcgcagcggacccggacggcgaaaagctgatcgccttt
ttgcgctccatggagttccgcaccatcacgcggcgggtggaggaggcgctgggggctggg
cctgccgacgagaccggcgatgccaccgcgcccgtggaccgctccggctatcaatgcgtg
cagacggcagaggccttgcaggactggatcgccagggcaaagcgcatgcgcgtcatcgcg
gtcgatacggagaccgatgcgctgtcagcgacggccgccgggctggttggcatttccatc
gcggtaaagccgggcgaagcctgctatatcccgttggctcacttaggcggggaccttgcc
gatggcggggggagacctcagcagatcgagatggcgcaggccatcgggctcctaaaacca
ctgctggaagacagggcggtcctgaaagtcggccagaacatcaaatatgatctggcggta
ctcgcccgtcagggcatcaatatggccccggtcgatgacactatgctgatctcctatgtg
caggaggcgggcctgcacgggcacggcatggacgagctctccgagctgcatctcggccac
aagccggtcgccttcaaggaggtggcgggcacaggcaaaaaccagaaatctttcggcgag
atcgatcttaagcgcgccacagaatatgccgccgaggacgccgacatcacgctgcgcctc
tatgagcttttaaagccgggtctggccggcaaagggctggcgactgtctatgagacgctg
gaacggcccatgcccgccgtgctggcacgcatggagctcaatggcatcaaggtcgatgtc
gcccagctctcaaggctgtcttcggagttcgcccagcgcatggcgcaggccgaggaagaa
gcgtttgaagccgcaggcacacgcttcaatctgggaagccccaaacagatcggcgacatc
atctttggtgatatgggcctgcccggcggcaagaagaccaagaccggcgcctggtccacg
gacgccagcgtcctcgaagagctggccaatgacggccatgctttgccgcgcgcgctgctg
acctggcggcagtttgccaagctgaaatcaacctattccgatgcgctcaaagccgcgatc
aaccccgataccggccgggtacatacatccttctcgctggcggcaacgacgacggggcgg
ctttccagctctgaccccaatttgcagaacattccgatccgtaccgaggaaggccgcctg
atccgggaagccttcgtggccgagaaaggccatgtgctggtggcggctgactattcccag
atcgagctcaggctgttggcccatattgccggggtcgacgctttgaaagatgccttcaag
gcgggccatgacattcacgccatgacggcgtccgaaatgttcggcgtgccgctcgaccag
atggacccgatgacccgccgcaaggccaaggccatcaattttggcattatttacgggatt
tccgcctttggcctggccaataatctcggcatcaagcgcgatgaggcgaaagcctatatc
gaggcctatttcgagaagtttcccggcatcgccgcctatatggacgcgatgaaggagacc
gcgcgggagaagggctatatcgagaccgtgttcgggcggcgctgccacttccccggcatt
cgcgacaagaacccgcaaatgcgccagttcgccgagcgtcaggccatcaacgcgcccatt
cagggctcagcggctgacatcatccggcgcgccatggcgcgcatggacgcggctattgaa
gaggcgggcctgaaagcgcgcatgctccttcaggtgcatgacgagctggtgtttgaatgc
cctgaggatgaggccggcgcgctgatcccgctggtgcaggacgtgatgggcaaggcggcc
ctgcccgcggtcgatctctccgtcccgctggtggtagaggccaaggccgccctcacctgg
gggcaggcgcattag
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