Glycocaulis alkaliphilus: X907_2459
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Entry
X907_2459 CDS
T05786
Name
(GenBank) peptidoglycan binding domain-containing protein
KO
K21470
L,D-transpeptidase YcbB
Organism
gak
Glycocaulis alkaliphilus
Brite
KEGG Orthology (KO) [BR:
gak00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gak01002
]
X907_2459
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gak01011
]
X907_2459
Peptidases and inhibitors [BR:
gak01002
]
Cysteine peptidases
Family C82
X907_2459
Peptidoglycan biosynthesis and degradation proteins [BR:
gak01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
X907_2459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF2087
Motif
Other DBs
NCBI-ProteinID:
AZU04974
UniProt:
A0A3T0ECG2
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All DBs
Position
complement(2537072..2538571)
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AA seq
499 aa
AA seq
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MGARAFFTTLALCALVLAVAGPAHARQAWSDSHIADLADALSEAWTHGLTSGHYPAPEAV
LALSAGPERDALAREGFMALARDLAIGRIDPRQLEPDWTAPQRRLDLDMAMATALRENAV
FATLEGFSPSHPDYMALRRELIRRHALLRAHSPIAGGPRLGLGDSGARVDALRARLHQEG
LLARLAPPDTPFDDMLRTALIRFQARHNLATDGVVGPGTLRELNTPPRHRLDQVRANLER
WRWVPRDLGERHIRVNLADYRLEAWSGGQVERVHRSMIGRGYNRTPIFSEDMTFIEINPV
WYTPTSLGAPWLRRFQTNPGYALASGYRLVDQSTGRVVNPSQADWANGRYRVIQVPGRGN
SMGEVKFMFPNIHNIYIHDTPHRALFDNVQRNESSGCVRVDEPRELAWWVLQGETGWTRE
AMEEAFDNGRTRRVWLRNHIPVHILYFTAVSDRFGHVRFIHDIYSRDAALIAALDADARG
ESAVEDHAEVLTAAVQGSP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcacgcgcctttttcacgacgttagcgctatgcgcactggtgttggccgtcgca
ggtcccgcgcatgcgcgccaggcgtggagcgacagccacatcgccgatctggccgatgcg
ttgagcgaggcgtggacgcacgggctgacatctggccattaccctgcacccgaagcggtg
ctcgccttgagcgcggggccggaacgcgatgcactggcccgcgagggcttcatggcgctc
gcgcgcgaccttgcgattggccggatcgatccgcgacagctggaaccggactggaccgcg
ccgcagcgcaggctcgacctcgacatggcgatggcgacagcccttcgtgagaatgccgtg
tttgccacgctggaggggttcagcccctcccaccctgactatatggccttgcgccgcgag
ctgatccgccgtcatgcgctgctgcgtgcccattcacccatagcaggcgggccgaggctg
gggcttggtgatagtggcgcgcgggtggatgcgttgcgtgcgcgcctgcatcaggaaggc
ttgctggcgcgactcgcgccaccggacacgccgtttgatgacatgctgcgaacggcgctg
atccgctttcaggcgcggcacaatctggcgacggacggggtcgtggggccgggtaccttg
cgggagctgaatacgccgccgcgtcaccggctcgatcaggtgcgcgccaatctggagcgc
tggcgctgggtgccgcgtgatctgggcgagcgccatatccgggtaaacctcgccgactac
cggctggaagcgtggtcaggcgggcaggtggagcgggtacaccgctccatgatcgggcgg
ggctataaccgcacgccgatcttctccgaggacatgacctttatcgagatcaatccggtc
tggtacacgcccaccagcctgggcgcgccctggctcaggcggttccagaccaatccgggc
tatgcgctggcgtcgggctaccggctggtggaccagtctaccggcagggtcgtcaacccg
tcgcaggcggactgggccaatggccgttaccgcgtcatccaggtgccgggacgcggcaat
tctatgggggaggtgaaattcatgttccccaacatccacaatatctacattcacgacacg
ccccatcgtgccctgtttgacaatgtgcagcgcaatgaatcctccggctgtgtacgcgtc
gacgagccgcgcgagctcgcctggtgggtgctgcagggcgagacgggctggacgcgcgag
gcgatggaggaggcctttgacaatggccgaacgcgccgcgtctggctgcgcaatcacatc
cctgtccacatcctctattttaccgccgtgtcggaccgtttcggccatgtccgcttcatc
cacgacatctatagccgcgacgcggctctcatcgcggcgctggacgccgatgcgcgcggg
gagagtgcggtggaggaccatgccgaagtcctcacggccgccgtgcagggcagcccgtga
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